Submitter | Handle | SC_SNP | Submitter SNP ID | SC-CHR6_NA11321-200402.chr1.NT_004671.15_3254170 | RefSNP(rs#) | rs6663538 | Submitted Batch ID | SC-CHR6_NA11321-200402 | Submitted Date | Feb 20, 2004 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_004671
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR6_NA11321 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | C/T | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | sequence position qualityS6A_2-296b14.q1k -412 45 |
>gnl|dbSNP|ss18339053|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic CACTggttat ctggaagtac cccttgtggc cagggttggc agtggctact gagtgaggct
cttctgcctt tggaaagggg agggaagagt gggaaggact gaatcttatg gtttgagtgc
cagctcagcc acggtacagg agaacaccag gcagaatgcc atggtttttt actctagtcc
ttgatttcca gatggcactt ctgggcccac ctgagacctt gaagacctcg ccacactaaa
gggatagaca caggcctagc aggctttgcc accggctcac tgtagagccc caggctcttg
agaaaacata tgcagaagcc agggaggtgt tatagcagac cttgggcaag acccagcact
gtgctggctt caggtctcac ccagcacagt catagtggtg gtggccacag aggtacttgt
gttactctac acccagattt aagtgactga gaacagagag actgtatatt tgagagaaag
taaaggaaga gagcaggact
Y
tctgcctggc aatccaggta attttctcac atcttgccca agaccatgaa ggctgtacct
ctacaacaca gcattactgg acttgggatg cctgttaaag caggtactgc ttaggtcaca
acacccaagt ccttttaaat atctagaaat atttcctcca aaggatggct gcaaataagc
acagacagtg aagataacaa taaataccta acccttcaat gcccagacac caaagaacat
ccactagcat caacaccatc ccgaaaacca taacctcaac aaatgaacta aataaggcat
cagggaccaa tcgtggagaa acagagattg aaatttgaaa taactgtgtt gaggaaactc
aaatacattc aagaaaacat acagaaggaa ttcagaattc tacaagataa atgtaacaga
gaaggaaaca attaaaaaca accaagggga aattctggat ttgaaagata caactgccat
actgactaat gcttttgagt
There is no frequency submission for ss18339053.
No sufficient data to compute Hardy-weinberg probability for ss18339053.
There is no individual genotype data for ss18339053.
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