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Submitted SNP(ss) Details: ss18339053           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR6_NA11321-200402.chr1.NT_004671.15_3254170
RefSNP(rs#)rs6663538
Submitted Batch IDSC-CHR6_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR6_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS6A_2-296b14.q1k -412 45

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18339053|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic
 CACTggttat ctggaagtac cccttgtggc cagggttggc agtggctact gagtgaggct
 cttctgcctt tggaaagggg agggaagagt gggaaggact gaatcttatg gtttgagtgc
 cagctcagcc acggtacagg agaacaccag gcagaatgcc atggtttttt actctagtcc
 ttgatttcca gatggcactt ctgggcccac ctgagacctt gaagacctcg ccacactaaa
 gggatagaca caggcctagc aggctttgcc accggctcac tgtagagccc caggctcttg
 agaaaacata tgcagaagcc agggaggtgt tatagcagac cttgggcaag acccagcact
 gtgctggctt caggtctcac ccagcacagt catagtggtg gtggccacag aggtacttgt
 gttactctac acccagattt aagtgactga gaacagagag actgtatatt tgagagaaag
 taaaggaaga gagcaggact
 Y
 tctgcctggc aatccaggta attttctcac atcttgccca agaccatgaa ggctgtacct
 ctacaacaca gcattactgg acttgggatg cctgttaaag caggtactgc ttaggtcaca
 acacccaagt ccttttaaat atctagaaat atttcctcca aaggatggct gcaaataagc
 acagacagtg aagataacaa taaataccta acccttcaat gcccagacac caaagaacat
 ccactagcat caacaccatc ccgaaaacca taacctcaac aaatgaacta aataaggcat
 cagggaccaa tcgtggagaa acagagattg aaatttgaaa taactgtgtt gaggaaactc
 aaatacattc aagaaaacat acagaaggaa ttcagaattc tacaagataa atgtaacaga
 gaaggaaaca attaaaaaca accaagggga aattctggat ttgaaagata caactgccat
 actgactaat gcttttgagt

  Submitted Frequency for ss18339053 back to top
There is no frequency submission for ss18339053.


  dbSNP summary of Genotypes for ss18339053 back to top
No sufficient data to compute Hardy-weinberg probability for ss18339053.


  Submitted individual genotype for ss18339053 back to top
There is no individual genotype data for ss18339053.

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