Submitter | Handle | SC_SNP | Submitter SNP ID | SC-CHR9-12_NA11321-200402.chr1.NT_034410.5_2009167 | RefSNP(rs#) | rs10900516 | Submitted Batch ID | SC-CHR9-12_NA11321-200402 | Submitted Date | Feb 20, 2004 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_034410
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR9-12_NA11321 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | G/T | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | sequence position qualityS9A_2-203l02.q1k -325 51 |
>gnl|dbSNP|ss18404540|allelePos=322|len=709|taxid=9606|alleles='G/T'|mol=Genomic GTACTCCTCA AAATCCAGAT TGTTTGTGCA TACATTTAAA AAAAAAAAAA TCAATGGAAA
TTTCCACCTT TGTTCGAACA CATAAAGTAT GCCATGAGCA ATATAACATC ACAAACGTAC
TGTGACAAAC CATTAATAAA GAAGGATTAC TAAgccaggt gtggtggtgc atgcctgtag
cccagctatg caggaggctg aggcaggagg atcacttgag cccgggagtt tgagtccacc
ctgggtaaca caccaagact ccatctctaa aaaaTTAAAT TAAAGGATTA CTGAAAGATC
TCATTTCTAA AAAAAGAAAA A
K
AAAAAGATCA CTGAAGTCAG ACATGATATT TTAATTTTGT ATTTTGAAAA GTCAGTATAT
AAATAAGAAA AAATTATTTT AGAAATTATG TGAAAATCCA CTCTTGGGTG GAGTAAATGC
AATGGTTTGC CAGCACTGGC TCTGAGCCAA CTGTGCACAT CCTTTCTGAA CTCTAAGGTG
GTAGCTTGAA ATCAGCCACA GGAGGAGTAA CTAATTTATA TCAAAGAATT TGatataaaa
ttctaattta tattagaatt ttatttataa tttatatttG CAgcaaatgc tacaaattca
gcgctccccc ccacccccac cccagagatc ctggttgtta aacatttcta gcacacgact
gAGTGGATAG CGACCAGAGC AGAAGGA
There is no frequency submission for ss18404540.
No sufficient data to compute Hardy-weinberg probability for ss18404540.
There is no individual genotype data for ss18404540.
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