Submitted SNP(ss) Details: ss184957333

Submitted SNP(ss) Details: ss184957333

Submitter
Handle	SNP500CANCER
Submitter SNP ID	CGFID_17360
RefSNP(rs#)	rs113749939
Submitted Batch ID	SNP500CANCER_01_04_10_MSMB
Submitted Date	Feb 01, 2010
Publication Cited	N.D.
First entry to dbSNP	Feb 1 2010 12:00:00:000AM

Resource Links
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	CGFID_17360

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	ROCHE/454 NEXT-GENERATION SEQUENCING
Ascertainment Samplesize	70
Population	N.D.

Allele
Observed Allele	-/A
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	DIV
CpG Code	N.D.

Validation
Validation Status	Not Validated
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	population count: 1
Genotype Summary	population count: 1
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 TAGCAGGTGC TTGGCTCTTG GCAGCCTCTC CCCTGGAGGA TGAGGTGGAG GCACCTGGAC
 ATGCCCTGGA GTGATCAGTG CTACAGGCCC AGCATCCCAC
 N
 GGGGTCCCGG AGTGTTGGGG TGATCAGACC CAACACCAGA TCGTGGGAGC GACAAAGTCT
 GGCGGAGTCA AAGGAATGAG AAAAAGACAG TTTGAGAGAG

Submitted Frequency for ss184957333

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
Pop2 - MULTI-NATIONAL	140				-/-=0.98571402 -/A=0.01428600		SNP500CANCER_01_04_10_MSMB	SNP500CANCER

dbSNP summary of Genotypes for ss184957333

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
Pop2 - MULTI-NATIONAL	140	140	-=0.99285716	A=0.00714286	-/-=0.98571426 -/A=0.01428571	Pr(chiSq=0.000,df=1) =1.000	Genotype Freq.

Submitted individual genotype for ss184957333

There is no individual genotype data for ss184957333.

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