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Submitted SNP(ss) Details: ss18607158           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR9-12_NA17119-200402.chr1.NT_026943.13_9016456
RefSNP(rs#)rs12238970
Submitted Batch IDSC-CHR9-12_NA17119-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR9-12_NA17119
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 4
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS9AA_12-722i08.q1k 89 26

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18607158|allelePos=203|len=703|taxid=9606|alleles='G/T'|mol=Genomic
 ATAGGGGTTA GTGTGGACAT TCATTTAGGT GACTCTGTGG AATAACTTAA GAAAATGTAT
 TATCTAACAG AAGAGGCCAG ACTTTCGATA AAGAAGATCA GGTCTTTGGT TCTGGATGTT
 TGGTCTTGTT TTCTTGTTTG GCGGTTTTGG GGAGTTTTGC TCTCTTTTAT TTTATTTTGT
 CCTCCAGATG AAAGTGGGGA ta
 K
 atgctgttgg tgctctgccc acatcccctt tactgagcag gacacaatcc caagctgcca
 tgactgttgt ctaccaatga ttcacagctg ccactctctc cagagaattg tctttagcag
 acaagggtcc cctcaccaaa gagattaccc tcaccacaag atcccccact ctgggggagc
 ccacagacaa tgactttcct tgagcaaggg gatttgaaat gctcaacgca gggcaaatct
 gtggtgagac tgatgctcca aaggtcgcta taatcaggcc aaggttagac ttggctcttt
 ccctttcctc ttcctgcttc cttactctct caggtttttc gtttgttctg tttggtttta
 tttttcagaa tagcaagctc tcaatcaatc aagggttaca tgacctatgt cacaagctct
 gcttcttgga gactcaaGAC TGGTAGTGTT TCCTTCTCTG TCTTGTCATA GATTTCATAA
 TCTGTATAAT GTAGGCAAAT

  Submitted Frequency for ss18607158 back to top
There is no frequency submission for ss18607158.


  dbSNP summary of Genotypes for ss18607158 back to top
No sufficient data to compute Hardy-weinberg probability for ss18607158.


  Submitted individual genotype for ss18607158 back to top
There is no individual genotype data for ss18607158.

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