| Submitter | | Handle | SC_SNP | | Submitter SNP ID | SC-CHR9-12_NA17119-200402.chr1.NT_004671.15_1054623 | | RefSNP(rs#) | rs12238971 | | Submitted Batch ID | SC-CHR9-12_NA17119-200402 | | Submitted Date | Feb 20, 2004 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_004671
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR9-12_NA17119 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | T/G | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | population count: 4 | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence position qualityS912AA-142o18.q1k -486 56 |
>gnl|dbSNP|ss18607159|allelePos=501|len=1001|taxid=9606|alleles='T/G'|mol=Genomic CCCActccat gggcacctgc ataattctgc cctgtgtttg tgctttgctg tgactgagtt
ccaatgcaga aatctcacac tcacttccct cttgctcccc aaagcacaca ggttctttct
ctgtgctgtg ctgcctgagg ctgaaggagg agtggtgtag gcattgccag actgttattc
ccaccctctt cagtgaatgt tttcttgata ttatgtaaaa actaggcacc gagattgctc
acctgatttt cttggttatt atgaatgtgg tttcttgtgt aaaaagttgt tcaatatggt
gttactgtac agggacgatt gctggggctt caatttggct accatgctct atctcctccc
tcaggttacc cacttGAATA TCAAAAGCAA TGGAACAAAT TAAAATTTGT GCCATCTGAT
ACAAAGGAAT Gagaacacac cattatttct gtgatattcc tgtgaaaaac aaataaccta
aatttaacaa tgacaacata
K
aggttaaatg caatttgaga tacattttat aaaatatcca ataatattta aaatattaag
gccatgaaag tcaaaacaac cactacagaa ttaaaaaaaa taaaggttca tgacaactaa
atgtaggagg tgatactgtc tttgtctctt ttaccataaa taacgtcatt aagaaaattg
gcaaaatgta aatggaatct ttggactaga tggtagaact atataaatgt tactgacctg
AGTTAATGGC TGCATTTtgt gactatacag gagaaagtct tgctttttat tgatatgtat
ttaagtattc aggagtgact gggcatcatc gaggaaactt actcttaacg ggtttaagaa
caaaaagatT CTTTGCCATA GCCTTGCAGG ATCAGTAGCT TGTGGTTGTA TCAAAATAAA
AACAAAAACA TGTTTGATAA TTATAATTTT ATATAACTGG CTAGAATATG TTAACTCTGA
AACACTCAAT CCACTATTTT
There is no frequency submission for ss18607159.
No sufficient data to compute Hardy-weinberg probability for ss18607159.
There is no individual genotype data for ss18607159.
| 
