Submitter | Handle | SC_SNP | Submitter SNP ID | SC-CHR9-12_NA17119-200402.chr1.NT_004559.11_4842799 | RefSNP(rs#) | rs12238978 | Submitted Batch ID | SC-CHR9-12_NA17119-200402 | Submitted Date | Feb 20, 2004 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_004559
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR9-12_NA17119 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | G/A | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | c_g/a |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | sequence position qualityS912AA-1708c21.p1k 536 51 |
>gnl|dbSNP|ss18607172|allelePos=501|len=725|taxid=9606|alleles='G/A'|mol=Genomic catcagtcaa tatatgtaag tacattggtt cagtctggaa aggcaggaaa acctgaagca
aaggcagaaa gattcaaagt ggggaggggc cttcctggtc acaaataggt gaaacacaaa
cagttgcatt cttttgagtt tctgatttgc ctttccaaag gaggcaatca gatatgcatc
tatttcagtg agcagacggg tgactttaaa tagaatggga ggcaggttgg ccctaagcag
ttcccagctt gacttttctc tttagccaag tgactttggg gccccaagat ttattttcct
ttcacGGGTA TATTTAGATA TTTAGAATCC TAATTTTTTG AGCAATTTTG ACATCTGAAA
TATTGAAAAG ATTACCATTA CAATTGCATT TAAAATGAAA CATTGAGTAA TTGGTTTTGA
CATGAGTTTT TAAGTTGAAA GGTTTAAAAA TTATGCAAAG GCTATCCATA ATATTGGATA
ATACAGTTAG CTTAATATTC
R
CCATCTTTAA GGGTAGCAGT TAATTTTGTG AACGTTATCT CTGCCTGCGT GGAGGGTTGC
AGTGAGAGAG GCCAGGGCTC CTGGATGTTG AGGTATGGAT GGTAGCCCAG CCCACCCATG
CTGTCTCTGG CCCTGCAGGT GACCACAGTC CCTCATTTTT GTCTGTGGTG GCGATGGTAT
CTGTGCAAGG CTGTGGtttt tttttttttt tttctttttt AATC
There is no frequency submission for ss18607172.
No sufficient data to compute Hardy-weinberg probability for ss18607172.
There is no individual genotype data for ss18607172.
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