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Submitted SNP(ss) Details: ss19058856           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHRX_NA11321-200402.chr1.NT_004671.15_8729524
RefSNP(rs#)rs10922218
Submitted Batch IDSC-CHRX_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityXChr_X_11321_2-415k14.p1k -214 51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19058856|allelePos=501|len=1001|taxid=9606|alleles='T/C'|mol=Genomic
 AGTTTCAATT TATTCAGCTT AATTACCTCA CTGTGAGGTT GTGAGAAATG AATAATACAG
 TAAAATACTT AGCAAAGTGA GCTGCACACC ATACCTACGC AATAGCAGTA GCTATTGTTA
 ATAATGTGCT CGCCctcgcc ctctccctct ccctctccct ctccctctcc ccacggtctc
 cctctccctc tctttccacg gtctccctct gatgccgagc cgaagctgga ctgtactgct
 gccatctcgg ctcactgcaa cctccctgcc tgattctcct gccttagcct gccgagtgcc
 tgcgattgca ggcgcgcgcc gccacgcctg actggttttc ttattttttt ggtggagacg
 gggtttcgct gtgttggccg ggctggtctc cagctcctaa ccgcgagtga tccgccagcc
 tcggcctccc gaggtgccgg gattgcagat ggagtctggt tcactcagtg ctcaatggtg
 cccaggctgg agtgcagtgg
 Y
 gtgatctcgg ctcgctacaa cctccacctc ccagccgcct gccttggcct cccaaagtgc
 cgagagtgca gcctctgccc ggccgccacc ccgtctggga agtgaggagc gtctctgcct
 ggccgcccat cgtctgggac gtgaggaacc cctctgcctg gcttgcccag tctggaaagt
 gaggagcgtc tctgcccggc cgccatccca tctaggaagt gaggagtgtc tctgcccggc
 cgcccatcgt ctgagatgtg gggagcgcct ctgccctgcc gccccgtctg ggaggtgagg
 agcgtctctg cccagccgcc ctgtctgaga agtgaggaga ccctccgcct ggcaaccgcc
 ccatctgaga agtgaggagc ccctccgccc ggtagctgcc ccgtctgaga agtgaggagc
 ccctccacct ggcagccacc ccgtctggga agtgaggagc gtctccgccc cgcagccacc
 ccgtctggga agGAGGTGGG

  Submitted Frequency for ss19058856 back to top
There is no frequency submission for ss19058856.


  dbSNP summary of Genotypes for ss19058856 back to top
No sufficient data to compute Hardy-weinberg probability for ss19058856.


  Submitted individual genotype for ss19058856 back to top
There is no individual genotype data for ss19058856.