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Submitted SNP(ss) Details: ss19058857           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHRX_NA11321-200402.chr1.NT_077988.2_32016
RefSNP(rs#)rs9658934
Submitted Batch IDSC-CHRX_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityXChr_X_11321_2-324l16.q1k 104 45

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19058857|allelePos=501|len=1001|taxid=9606|alleles='T/G'|mol=Genomic
 tgtatatagt gcaagagagg tttctagttt aactattctg ccaatgactt gggaggccga
 ggtgggcgga tcatgggggc aggagatcga gaccatcctg gctaacacgg tgaaactctg
 tctctactaa aagtacaaaa aaaaatttag ccaggcgtgg tggtgggcac ctgtactccc
 agctacttgg gaggctgagg aggagaatgg tgtgaacccg ggaggtggag cttgcagtga
 gcccagatcg cgccactgca ctccagcctg agcaacagag ctagactcca tctcaaaaaa
 aaaaaaaagc tgacaatgaa tatctagttt tcccagcaca atttgttgaa gagactgtcc
 tctcccccat gtatattctt ggcaccttca ttgaaaatga gttaattgta aatgtatgga
 tttatttctg ggttctctat tctgttccat tggtctatgt gtctgtttta tgccagtacc
 atgctgtttt gtttataatt
 K
 ctctgtacta taatttaaag tcaggtgatg tgattcttcc agttttgttc tttttgctca
 ggatggcttt tggtattctg ggtcttttat ggtttcatgt aaattttagg attttttttc
 tatttctgtg aagagagtta ttagtatttc aatagggatt gcattgaatc tgtagattgc
 tttgtgaagt atgggtattt taacaatatt tactcttcca ataaatgaac atggactatc
 tttccatttt ttttggtgtc ctctttaatt tttttgcatc tatgttttat agttttcatt
 gtagagatct ttcacttctt ctgttatgtt tattcccagt tattttattt tatttgtagc
 tattgtaaat gggattacat tcttgatttt cttctttaga ttgttcattt ttgtcattta
 gaaatgctac tgacttttgt agtttgattt tgtatgctgt gactctgaat ttgttgatca
 gttctaatag tttttggtgg

  Submitted Frequency for ss19058857 back to top
There is no frequency submission for ss19058857.


  dbSNP summary of Genotypes for ss19058857 back to top
No sufficient data to compute Hardy-weinberg probability for ss19058857.


  Submitted individual genotype for ss19058857 back to top
There is no individual genotype data for ss19058857.