| Submitter | | Handle | SC_SNP | | Submitter SNP ID | SC-CHRX_NA11321-200402.chr1.NT_077988.2_25124 | | RefSNP(rs#) | clustering in process | | Submitted Batch ID | SC-CHRX_NA11321-200402 | | Submitted Date | Feb 20, 2004 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_077988
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHRX_NA11321 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | A/C | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence position qualityXChr_X_11321_2-509k08.p1k -509 51 |
>gnl|dbSNP|ss19058858|allelePos=501|len=1001|taxid=9606|alleles='A/C'|mol=Genomic TCCCCAGTTg acacagtctg gcaaattgga taaagagtca agacccatca atgtgttgta
ttcaggagac ccatctcata cacataggct caaaataaag ggatgaataa acatttacca
agcaagtgga aagcaacaaa aggcaggggt tgcaatccta gtttctgata aaacagatct
taagccaaca aagataaaaa gagacaaaga agggcattac ataatggtaa agggatcaat
gcaacaagaa gagctaacta tcctagacat atatgcaccc aatacaggag cactcagatt
cataaagcaa gttcttaaag acctacaaag agacttaggc tcccacacaa taatagtggg
agactttaac actccactgt caatattaga tcgatgagac agaaaattaa caagaatatc
caggacttga actcagttct ggaccaagtg gacctaaaag atatctacag aactctccac
cccaaatcaa cagaatgtac
M
ttcttctcag caccgcattg tacttattct aaaattgacc acataattgg aagtaaaaca
ctcctcagga aatgcaaaag aatggaaatc ataacaaaca gtctctcaga ccacaatgta
ttcaaattag tatgcaggat taagaaactc actcaaaacc tcacaactac atggaaactg
ggcaacctgc tcctgaatga ctactgggta aataacgaaa tgaaggcaga aataaagatg
ttcttcaaaa ccaatgagaa caaagacaca acgtaccaga atctctggga cacatttaaa
gcagtgtgta gagggaaatt tatagcacta aatgcccaca agagaaagca ggaaagatct
aaaattgaca ccttaacatc aaaattaaaa gaactagaga agaaagaaca aacaaattca
aaagctagga gatgacaaga cataaataag atcagagcag aattgaacga gatagagaca
tgaaaaaccc ttcaaaaaat
There is no frequency submission for ss19058858.
No sufficient data to compute Hardy-weinberg probability for ss19058858.
There is no individual genotype data for ss19058858.
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