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Submitted SNP(ss) Details: ss19058859           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHRX_NA11321-200402.chr1.NT_032977.6_33918391
RefSNP(rs#)clustering in process
Submitted Batch IDSC-CHRX_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityXChr_X_11321_2-375o05.p1k -637 51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19058859|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic
 aaactctaaa acgcagagcg cctctcctcc tccaaaggaa cgcagttcct caccagcaac
 ggaacaaagc tggatggaga atgattttga cgagctgaga gaagaaggct tcagacgatc
 aaattactct gagctacggg aggacattca aaccaaaggc aaagaagttg aaaactttga
 aaaaaattta gaagaatgta taactagaat aaccaataca gagaagtgct taaaggagct
 gatggagctg aaaaccaagg ctcgagaact acgtgaggaa tgcagaagcc tcaggagccg
 atgcgatcaa ctggaagaaa gggtatcagc aatggaagat gaaatgaatg aaatgaagcg
 agaagggaag tttagagaaa aaagaataaa aagaaatgag caaagcctcc aagaaatatg
 ggactatgtg aaaagaccaa atctacgtct gattggtgta cctgaaagtg atgtggagaa
 tggaaccaag ttggaaaaca
 Y
 tctgcaggat attatccagg agaacttccc caatctagca aggcaggcca acgttcagat
 tcaggaaata cagagaacgc cacaaagatt ctcctcgaga agagcaactc caagacacat
 aattgtcaga ttcaccaaag ttgaaatgaa ggaaaaaata ttaagggcag ccagagagaa
 aggtcgggtt accctcaaag gaaagcccat cagactaaca gcggatctct cggcagaaac
 cctacaagcc agaagagagt gggggccaat attcaacatt cttaaagaaa agaattttca
 acccagaatt tcatatccag ccaaactaag cttcataagt gaaggagaaa taaaatactt
 tatagacaag caaatgctga gagattttgt caccaccagg cctgccctaa aagagctcct
 gaaggaagtg ctaaacatgg aaaggaacaa ccggtaccag ccgctgcaaa atcatgccaa
 aatgtaaaga ccatccagac

  Submitted Frequency for ss19058859 back to top
There is no frequency submission for ss19058859.


  dbSNP summary of Genotypes for ss19058859 back to top
No sufficient data to compute Hardy-weinberg probability for ss19058859.


  Submitted individual genotype for ss19058859 back to top
There is no individual genotype data for ss19058859.