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Submitted SNP(ss) Details: ss19058861           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHRX_NA11321-200402.chr1.NT_032977.6_33918887
RefSNP(rs#)clustering in process
Submitted Batch IDSC-CHRX_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityXChr_X_11321_2-375o05.p1k -141 39

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19058861|allelePos=501|len=1001|taxid=9606|alleles='C/G'|mol=Genomic
 aacactctgc aggatattat ccaggagaac ttccccaatc tagcaaggca ggccaacgtt
 cagattcagg aaatacagag aacgccacaa agattctcct cgagaagagc aactccaaga
 cacataattg tcagattcac caaagttgaa atgaaggaaa aaatattaag ggcagccaga
 gagaaaggtc gggttaccct caaaggaaag cccatcagac taacagcgga tctctcggca
 gaaaccctac aagccagaag agagtggggg ccaatattca acattcttaa agaaaagaat
 tttcaaccca gaatttcata tccagccaaa ctaagcttca taagtgaagg agaaataaaa
 tactttatag acaagcaaat gctgagagat tttgtcacca ccaggcctgc cctaaaagag
 ctcctgaagg aagtgctaaa catggaaagg aacaaccggt accagccgct gcaaaatcat
 gccaaaatgt aaagaccatc
 S
 agactaggaa gaaactgcat caactaacga gcaaaatcac cagctaacat cataatgaca
 ggatcaaatt cacacataac aatattaact ttaaatataa atggactaaa ttctgcaatt
 aaaagacaca gactagcaag ttggataaag agtcaagacc catcagtgtg ctgtattcag
 gaaacccatc tcacgtgcag agacacacat aggctcaaaa taaaaggatg gaggaagatc
 taccaagcca atggaaaaca aaaaaaggca ggggttgcaa tcctagtctc tgataaaaca
 gactttaaac caacaaagat caaaagagac aaagaaggcc attacataat ggtaaaggga
 tcaattcaac aagaggagct aactatccta aatatttatg cacccaatac aggagcaccc
 agattcataa agcaagtcct gagtgaccta caaagagact tagactccca cacattaata
 atgggagact ttaacacccc

  Submitted Frequency for ss19058861 back to top
There is no frequency submission for ss19058861.


  dbSNP summary of Genotypes for ss19058861 back to top
No sufficient data to compute Hardy-weinberg probability for ss19058861.


  Submitted individual genotype for ss19058861 back to top
There is no individual genotype data for ss19058861.