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Submitted SNP(ss) Details: ss19058862           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHRX_NA11321-200402.chr1.NT_028050.13_331441
RefSNP(rs#)rs12380987
Submitted Batch IDSC-CHRX_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityXChr_X_11321_2-575m06.q1k 148 28

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19058862|allelePos=501|len=1001|taxid=9606|alleles='G/T'|mol=Genomic
 ttagctaata tgtgtacaca gagaattatt tttacaatta atgttttaac acttgtttaa
 acattcaaaa cagtaatttt ttttaacttt ttaatgtagg taaaaatgta cattcttatg
 cctccttata attcttttac caaaggtata ctttactttt tttatacacc ttgcacataa
 actttttttt ttttaatagt tttacattca ggaggcctag ttacttttaa attatgcaac
 attttttgca taaattcttt tttataactt tttttctttc atgacttttg aagacaattc
 tttgacatgt ctcaacttta tgacttacta caaatatttc tttctttaaa caaccagtta
 atttatttca gagcaagaat ttaccatata atacttttta tataaattcc accttccctt
 ttttttcctt ttttttttcc cttaggatac ttctgaactg gcgaggtgtg ctcacaatga
 ggttttctct aaaagttatt
 K
 ttttttactt ttgttgttgt cgttgttgtt gttgttagca aaacagttgc tgctacagat
 tgaatgcatt tgggccatcc gcgggttact gggttaagga tttttgatag gaaggcctca
 gtgctttcgg gatacgccct tgtttacact gacaaagtgg tattggagtg ttatagggtt
 acggaggata ccttcaatta tcgattatag gttttaaatt taccttggct tttaaaagaa
 tagggtacac ttttttttaa ctacttgtat atctctttct ttctctcttt gactttgtct
 ctctcttttt gactcctttt gcgtctgtct cttcctctct ctctctgcct cctctttctc
 tctctctcct tgacttcctc tttgtctgtc tcttcctctg tctcttcctc tctctctttg
 cctcttttcc tctctgtctc tttcctttct ctctctctgc tggtctttcc ttgcctttgc
 cagctgcttc tgctgctgtt

  Submitted Frequency for ss19058862 back to top
There is no frequency submission for ss19058862.


  dbSNP summary of Genotypes for ss19058862 back to top
No sufficient data to compute Hardy-weinberg probability for ss19058862.


  Submitted individual genotype for ss19058862 back to top
There is no individual genotype data for ss19058862.