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Submitted SNP(ss) Details: ss19058865           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHRX_NA11321-200402.chr1.NT_022071.12_85695
RefSNP(rs#)clustering in process
Submitted Batch IDSC-CHRX_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityXChr_X_11321_2-468h13.p1k -283 51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19058865|allelePos=501|len=1001|taxid=9606|alleles='A/G'|mol=Genomic
 ATTCTcctca gtcttcattc ttttgtctac cactcttttt ctgccttttg cagttttcat
 tgatgatttt agatgactac attttccctg tctttcttag catgtacttc tctttttaaa
 actttttttt taactagttg ccacagaatt tgcaatatac atttacaacc aattcaagtc
 cactttcaaa taacactatc ccactatccc acaaataaga ctacctgctt aacaaacaaa
 acacctaatt cctcAGTAac atttacaaca aattgaagtc cactttcaaa taacgctatc
 acactatccc acaaataaga ctacctgctt aacaaagaac acacctaatt cctcagtata
 catttacaac caattcaagt ccactttcag ataacactat cccacttcac gggtgactac
 ctgcttaaca aagaaaacac ctgattcctc cctcccatcc ttcctttcca ttccttgtat
 tattgttcct tatttcacta
 R
 tgtataagca tacataatct atctgtgtgt atttattatt atctacaaac ttattggtca
 gatcaattat gaataaatac atgtttttat tgtaccACAA TTCCTCCCTC CCATCCTTCC
 ATTCCATTCC TTGTATTAGT GTTACTCATT TAACTTTTGT ataagcatac ataatctatc
 tgtgtgtatt tgttattgtc tatgaacttc ttggtcagat caattaagaa taaatacata
 ggtttttatt gtaccacaat tctttaatgc tctttttaaa aaaatgttga tccagatttc
 agttatatat cttttgtttc cctctaaaga atttcattta acatttcttg caagacaggt
 ctcctggcaa caagtttctt gaatttttat ttttctgagg aaggccttaa ttctccttca
 cttttgaagg gtggtttcag tgggtacaga aacttaggtt ggtgggtttt tttctgtcaa
 cattttgaat ttttcatttc

  Submitted Frequency for ss19058865 back to top
There is no frequency submission for ss19058865.


  dbSNP summary of Genotypes for ss19058865 back to top
No sufficient data to compute Hardy-weinberg probability for ss19058865.


  Submitted individual genotype for ss19058865 back to top
There is no individual genotype data for ss19058865.