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Submitted SNP(ss) Details: ss19058868           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHRX_NA11321-200402.chr1.NT_022071.12_33682
RefSNP(rs#)clustering in process
Submitted Batch IDSC-CHRX_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityXChr_X_11321_2-175b07.q1k -337 45

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19058868|allelePos=501|len=1001|taxid=9606|alleles='T/C'|mol=Genomic
 gttgtaatac agcttcttgc atacaataat gctaatgcag agtgtcaaac tgctattaga
 tcccagacaa agagggccca tttaactaaa tatattaagg cttgcgatgg cattggagat
 aatttacata aggttattct tttagctcag gctgtggcta gattaagagt aagaaaaaat
 atgcttcatt tctcaggctc ttgccttaat tgtgggcaaa ttggacagaa gaaaggaatg
 tagaaaggaa ttcaaaagac gaaaactact accatcaatc aacagaaaag tcccaatgta
 cgtccctggt gtaagaaagg caatcactgg gcaagtccgt gtcattctaa atttagcaaa
 gatgggcaat ctctttcagg aaataggaag agggacccgc ctcaagcccc tcaacaaact
 gaggcatacc cagcacagcc actgccctta caaatgtaca gcaattgtcc cccgcctcag
 caagtagtgc tgctgtagac
 Y
 tctacagcac aattcccatc tccttgcttc ctggggagcc accaaagaag gtccccacag
 gagttagggt acccttaccc tgaggaaAtg ttgggaacaa gcctccccaa atccggccat
 aaactggccc caaaactggc cataaacaaa atctctgcag cactgtgaca tgttcatgat
 ggccataaca cccacgctgg aaggttgtgg gtttactgga atgaggacaa ggaatacctg
 gcccgtccag ggtggaaaac cacttaaagg cattcttaag ccacaaacaa tagcatgagt
 gatctgtgcc ttaagaataa gggatacttt tagttaatct aatatctata gaaacaatgc
 taatgactgg cttgctgtta ataaatacgt gggtaaatct ctgttcaggg ctctgctctg
 aaggctgtaa gaccccccca ccccccgatt tcccccttca cacctctata tttctgtgtg
 tgtgtcttta attcctctag

  Submitted Frequency for ss19058868 back to top
There is no frequency submission for ss19058868.


  dbSNP summary of Genotypes for ss19058868 back to top
No sufficient data to compute Hardy-weinberg probability for ss19058868.


  Submitted individual genotype for ss19058868 back to top
There is no individual genotype data for ss19058868.