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Submitted SNP(ss) Details: ss19058869           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHRX_NA11321-200402.chr1.NT_022071.12_33836
RefSNP(rs#)clustering in process
Submitted Batch IDSC-CHRX_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityXChr_X_11321_2-175b07.q1k -183 51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19058869|allelePos=501|len=1001|taxid=9606|alleles='T/G'|mol=Genomic
 tggctagatt aagagtaaga aaaaatatgc ttcatttctc aggctcttgc cttaattgtg
 ggcaaattgg acagaagaaa ggaatgtaga aaggaattca aaagacgaaa actactacca
 tcaatcaaca gaaaagtccc aatgtacgtc cctggtgtaa gaaaggcaat cactgggcaa
 gtccgtgtca ttctaaattt agcaaagatg ggcaatctct ttcaggaaat aggaagaggg
 acccgcctca agcccctcaa caaactgagg catacccagc acagccactg cccttacaaa
 tgtacagcaa ttgtcccccg cctcagcaag tagtgctgct gtagacttct acagcacaat
 tcccatctcc ttgcttcctg gggagccacc aaagaaggtc cccacaggag ttagggtacc
 cttaccctga ggaaAtgttg ggaacaagcc tccccaaatc cggccataaa ctggccccaa
 aactggccat aaacaaaatc
 K
 ctgcagcact gtgacatgtt catgatggcc ataacaccca cgctggaagg ttgtgggttt
 actggaatga ggacaaggaa tacctggccc gtccagggtg gaaaaccact taaaggcatt
 cttaagccac aaacaatagc atgagtgatc tgtgccttaa gaataaggga tacttttagt
 taatctaata tctatagaaa caatgctaat gactggcttg ctgttaataa atacgtgggt
 aaatctctgt tcagggctct gctctgaagg ctgtaagacc cccccacccc ccgatttccc
 ccttcacacc tctatatttc tgtgtgtgtg tctttaattc ctctagtgct gctgggttag
 ggtctctcca accgacctgg tctcagcaag tggtgcccat tcatgggagc tcgaatacag
 gtcaaaggat cgctggagca acgattggag aatgtggaac tagctggagg acacccgagt
 actcttaaag caatccccgt

  Submitted Frequency for ss19058869 back to top
There is no frequency submission for ss19058869.


  dbSNP summary of Genotypes for ss19058869 back to top
No sufficient data to compute Hardy-weinberg probability for ss19058869.


  Submitted individual genotype for ss19058869 back to top
There is no individual genotype data for ss19058869.