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Submitted SNP(ss) Details: ss19058870           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHRX_NA11321-200402.chr1.NT_077988.2_14919
RefSNP(rs#)rs12380990
Submitted Batch IDSC-CHRX_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityXChr_X_11321_2-481p09.p1k -737 31

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19058870|allelePos=501|len=1001|taxid=9606|alleles='C/G'|mol=Genomic
 aaaaaaggca aggcagctta ttgggtaaat caaattactg ataaacatcc tatctgtgaa
 ataactatcc agggaaagaa ctttaaaggt ttggtagata ctattttttt ttttttagta
 ggagtggaca tttcaatcat ttctctacag cactggttgt ccatgtggcc aattcagccc
 actcaattta acacagtgga aactgctaaa gctccagaag tgtatcaaag tagctatatt
 ttacattgtg aagggcccga tggacaacct gggactgttc aaccaattgc aatttctgta
 cctataaatt tatgggggag agatttatta tgacgatggg gagcacaagt tctaattcca
 taacaattat acagccctca aagtcaacat atgatgcacg aaatggggca tgtccctggt
 ataggagtag aaaaaaattg caaggtttga aagaactgct tcaaacggaa agacaaagtt
 cctgccaaag attaggatac
 S
 atttttgatg gtggccactg ttaagcctcc aaaacctata cctttaaaat ggttaacaga
 taagccaatt tggatagaat aatggctgct aggcaaagag aaactggatg ctttagagaa
 attagttact gaacaattag aaaatgggca catagctcca acattttccc cttggaattc
 tccagtgttc ataattaaga aaaaatcagg taaatggaga atgttaactg acttaagagc
 catcaattca gttatacaac ctatggaaac ataacagcca ggattgcctt ctcctactat
 aattccaaaa aattggcctt taatagtcac agatttaaaa gactgtttct ttactaccct
 tttagctgag caagactgtg aacggtttgc atttacaatt cctgcagtaa acaacctgca
 gcctgctaag cgttttcgtt gtttcacaga tgggtctagt aatggtaaag cttcttattc
 tggatcaaaa ggtaaagttt

  Submitted Frequency for ss19058870 back to top
There is no frequency submission for ss19058870.


  dbSNP summary of Genotypes for ss19058870 back to top
No sufficient data to compute Hardy-weinberg probability for ss19058870.


  Submitted individual genotype for ss19058870 back to top
There is no individual genotype data for ss19058870.