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Submitted SNP(ss) Details: ss19058871           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHRX_NA11321-200402.chr1.NT_079482.1_1481319
RefSNP(rs#)rs10908296
Submitted Batch IDSC-CHRX_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityXChr_X_11321_2-50j23.q1k -642 51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19058871|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic
 AAGAAAAGTC AGGGTAAAAT TCTTGAATCA ATTGTGGAGT TACGTGTTTT TAACTATTTT
 ATGTAAGTTT TCTAATTATT TGCATAAAGT TGTTCATAGT ATACTCtttt attttggaga
 gacagggtct tgctgtgttg cctaggctgg agtgtggtgg cacaatggga gctcacagca
 gcctcaaacc tcaagtgatc ctcccacttc agcctcccga gtagctagga ctataggtgt
 gcaccaccac acctggctag tttttaagtt tattgtaaag aaaaggtctt gctatgttgc
 ccaggctgat attgaactcc tgtgctcaag tgatcctcct gccttggcct cccaaaatac
 tgggattaca gttgtgaggc acttcactca gctgtttttg ttatcttttt aatgacaact
 gtcctagtgg gtatgaagtg gtatctcatt gtggctttga tttgcatttc tctgatggct
 aatgatgctg aacatatttt
 Y
 tttttttttt tttttttttt gagacggagt ctcgctctgt cacccaggct ggagtgcagt
 ggtgcgatct tggctcactg caagctctgc ctcccgggtt cacgccattc tcctgcctca
 gcctctccga gtagctggga ctacaggcgc ccgccaccac acccagctaa ttttttgtat
 ttttagtaga gacggggttt cactgtgtta gccaggatgg tctcgatctc ctgacctcgt
 gattcacccg ctttggcctc ccaaagtgct gggattacaa gcgtgagcca ccgcgcccgg
 cccgatgctg agcatatttt catgtgctta tttcttttgg agaaatgtct gtttggatcc
 tttgcccatt taaaaaattg gattatttgt ctttttacta ttgaggaaga gttctctata
 tattctagat aaaagtccct aatcatatat atgcgtatat atatatatgg tttgcaatat
 tttctcccat tctTTTTTTT

  Submitted Frequency for ss19058871 back to top
There is no frequency submission for ss19058871.


  dbSNP summary of Genotypes for ss19058871 back to top
No sufficient data to compute Hardy-weinberg probability for ss19058871.


  Submitted individual genotype for ss19058871 back to top
There is no individual genotype data for ss19058871.