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Submitted SNP(ss) Details: ss19058877           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHRX_NA11321-200402.chr1.NT_004671.15_8729175
RefSNP(rs#)rs12380994
Submitted Batch IDSC-CHRX_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityXChr_X_11321_2-415k14.p1k -563 45

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19058877|allelePos=418|len=918|taxid=9606|alleles='C/T'|mol=Genomic
 TTCTTGTCTT CATACACATT TTAATGGGAT ATTGACAGTA ACTGTTAAAT AGATGATGCT
 ATAGAGTGGA TATGTGCCCC TGCTAAACAG CAATTATTAT TGTTGTTTAC ATGTTTCAAA
 CTTGTTTACA TTGCTTCAAT ATAGCTAAAC TTGTGATAGA TATAACTGTA ACTAATTTGT
 ATTTGGGCAC Tgccagatct aaatttaagt tctggcacta ccactgtcta attctgtgac
 ttttggcaag tttcataagc tgtcaaagtt tcaatttatt cagctTAATT ACCTCACTGT
 GAGGTTGTGA GAAATGAATA ATACAGTAAA ATACTTAGCA AAGTGAGCTG CACACCATAC
 CTACGCAATA GCAGTAGCTA TTGTTAATAA TGTGCTCGCC ctcgccctct ccctctc
 Y
 ctctccctct ccctctcccc acggtctccc tctccctctc tttccacggt ctccctctga
 tgccgagccg aagctggact gtactgctgc catctcggct cactgcaacc tccctgcctg
 attctcctgc cttagcctgc cgagtgcctg cgattgcagg cgcgcgccgc cacgcctgac
 tggttttctt atttttttgg tggagacggg gtttcgctgt gttggccggg ctggtctcca
 gctcctaacc gcgagtgatc cgccagcctc ggcctcccga ggtgccggga ttgcagatgg
 agtctggttc actcagtgct caatggtgcc caggctggag tgcagtggtg tgatctcggc
 tcgctacaac ctccacctcc cagccgcctg ccttggcctc ccaaagtgcc gagagtgcag
 cctctgcccg gccgccaccc cgtctgggaa gtgaggagcg tctctgcctg gccgcccatc
 gtctgggacg tgaggaaccc

  Submitted Frequency for ss19058877 back to top
There is no frequency submission for ss19058877.


  dbSNP summary of Genotypes for ss19058877 back to top
No sufficient data to compute Hardy-weinberg probability for ss19058877.


  Submitted individual genotype for ss19058877 back to top
There is no individual genotype data for ss19058877.