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Submitted SNP(ss) Details: ss19058878           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHRX_NA11321-200402.chr1.NT_004671.15_8729648
RefSNP(rs#)rs12380995
Submitted Batch IDSC-CHRX_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityXChr_X_11321_2-415k14.p1k -90 51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19058878|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic
 TGTGCTCGCC ctcgccctct ccctctccct ctccctctcc ctctccccac ggtctccctc
 tccctctctt tccacggtct ccctctgatg ccgagccgaa gctggactgt actgctgcca
 tctcggctca ctgcaacctc cctgcctgat tctcctgcct tagcctgccg agtgcctgcg
 attgcaggcg cgcgccgcca cgcctgactg gttttcttat ttttttggtg gagacggggt
 ttcgctgtgt tggccgggct ggtctccagc tcctaaccgc gagtgatccg ccagcctcgg
 cctcccgagg tgccgggatt gcagatggag tctggttcac tcagtgctca atggtgccca
 ggctggagtg cagtggtgtg atctcggctc gctacaacct ccacctccca gccgcctgcc
 ttggcctccc aaagtgccga gagtgcagcc tctgcccggc cgccaccccg tctgggaagt
 gaggagcgtc tctgcctggc
 Y
 gcccatcgtc tgggacgtga ggaacccctc tgcctggctt gcccagtctg gaaagtgagg
 agcgtctctg cccggccgcc atcccatcta ggaagtgagg agtgtctctg cccggccgcc
 catcgtctga gatgtgggga gcgcctctgc cctgccgccc cgtctgggag gtgaggagcg
 tctctgccca gccgccctgt ctgagaagtg aggagaccct ccgcctggca accgccccat
 ctgagaagtg aggagcccct ccgcccggta gctgccccgt ctgagaagtg aggagcccct
 ccacctggca gccaccccgt ctgggaagtg aggagcgtct ccgccccgca gccaccccgt
 ctgggaagga ggtgggggtc agcccccgcc aggccagccg tcccgtccgg gagggaggtg
 ggggggtcag ccccccgccc ggccagccgc cccgtccggg aggtgagggg cgcctctgcc
 cggccgcccc tactgggaag

  Submitted Frequency for ss19058878 back to top
There is no frequency submission for ss19058878.


  dbSNP summary of Genotypes for ss19058878 back to top
No sufficient data to compute Hardy-weinberg probability for ss19058878.


  Submitted individual genotype for ss19058878 back to top
There is no individual genotype data for ss19058878.