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Submitted SNP(ss) Details: ss19058879           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHRX_NA11321-200402.chr1.NT_077988.2_25015
RefSNP(rs#)clustering in process
Submitted Batch IDSC-CHRX_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityXChr_X_11321_2-509k08.p1k -618 56

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19058879|allelePos=501|len=1001|taxid=9606|alleles='C/A'|mol=Genomic
 CGATgaaaaa actgcatcaa ctaatgagca aaataaccag ctagtatcat aatgacagga
 tcaaattcac acataacaat attaacctta aatgtaaatg agctaaatgt ccccagttga
 cacagtctgg caaattggat aaagagtcaa gacccatcaa tgtgttgtat tcaggagacc
 catctcatac acataggctc aaaataaagg gatgaataaa catttaccaa gcaagtggaa
 agcaacaaaa ggcaggggtt gcaatcctag tttctgataa aacagatctt aagccaacaa
 agataaaaag agacaaagaa gggcattaca taatggtaaa gggatcaatg caacaagaag
 agctaactat cctagacata tatgcaccca atacaggagc actcagattc ataaagcaag
 ttcttaaaga cctacaaaga gacttaggct cccacacaat aatagtggga gactttaaca
 ctccactgtc aatattagat
 M
 gatgagacag aaaattaaca agaatatcca ggacttgaac tcagttctgg accaagtgga
 cctaaaagat atctacagaa ctctccaccc caaatcaaca gaatgtacat tcttctcagc
 accgcattgt acttattcta aaattgacca cataattgga agtaaaacac tcctcaggaa
 atgcaaaaga atggaaatca taacaaacag tctctcagac cacaatgtat tcaaattagt
 atgcaggatt aagaaactca ctcaaaacct cacaactaca tggaaactgg gcaacctgct
 cctgaatgac tactgggtaa ataacgaaat gaaggcagaa ataaagatgt tcttcaaaac
 caatgagaac aaagacacaa cgtaccagaa tctctgggac acatttaaag cagtgtgtag
 agggaaattt atagcactaa atgcccacaa gagaaagcag gaaagatcta aaattgacac
 cttaacatca aaattaaaag

  Submitted Frequency for ss19058879 back to top
There is no frequency submission for ss19058879.


  dbSNP summary of Genotypes for ss19058879 back to top
No sufficient data to compute Hardy-weinberg probability for ss19058879.


  Submitted individual genotype for ss19058879 back to top
There is no individual genotype data for ss19058879.