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Submitted SNP(ss) Details: ss19058885           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHRX_NA11321-200402.chr1.NT_032962.5_3079998
RefSNP(rs#)rs11205042
Submitted Batch IDSC-CHRX_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityXChr_X_11321_2-480l10.q1k 116 40

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19058885|allelePos=501|len=1001|taxid=9606|alleles='C/G'|mol=Genomic
 tgcaatctac tcatctgaca aagggctaat atccagaatc tacaatgaac tcaaacaaat
 ttacaagaaa aaagcaaaca accccatcaa aaagtgggcg aaggatatga acagacactt
 ctcaaaagaa gacatttatg cagccaaaag acacatgaaa aaatgctcaa catcactggc
 catcagagaa atgtaaatca aaaccacaat gagataccat ctcacaccag ttagaatggc
 aatcattaaa aagtcaggaa acaacaggtg ctggagagga tgtggagaaa tgggaacact
 tttacaatgt tggtgggact gtaccattgt ggaagtcagt gtggcgattc ctcaggaatc
 tagaactaga aataccattt gacccagcca tcccattact gggtatatac ccaaaggatt
 ataaatcatg ctgctataaa gacacatgca cacgtatgtt tattgtggca ctattcacaa
 tagcaaagac ttggaaccaa
 S
 ccaaatgtcc aacaatgata gactggatta agaaaatgtg gcacatatac accatggaat
 actatgcagc cataaaaaat gatgagttca tgtcctctgt agggacatgg atgaagctgg
 aaaccatcat tctcagcaaa ctatcgcaag gacaaaaaac caaacactgc atgttctcac
 tcataggtgc gaattgaaca atgaggacac atggacacag gaaggggaac atcacacacc
 agggcctgtt gtggggtggg ggtagggggg agggatagca ttacgagata tacctaatgt
 taaatgacga gttaatgggt gcacaccaac atggcacatg tatacatatg taacaaacct
 gcatgttgtg cacatgtacc ctaaaactta aagtataatt aaaaaaaaTA AAGGCCTGAC
 TTTTCTTGGA TGATACCGTG GGAGGAGTGA TTTGACCCTG TAGCCCACAG TTTCCATTGA
 CGGTGATGTA GAGAATCAGA

  Submitted Frequency for ss19058885 back to top
There is no frequency submission for ss19058885.


  dbSNP summary of Genotypes for ss19058885 back to top
No sufficient data to compute Hardy-weinberg probability for ss19058885.


  Submitted individual genotype for ss19058885 back to top
There is no individual genotype data for ss19058885.