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Submitted SNP(ss) Details: ss19825529           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR13_NA11321-200402.chr1.NT_077988.2_31872
RefSNP(rs#)rs9660003
Submitted Batch IDSC-CHR13_NA11321-200402
Submitted DateFeb 21, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 21 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR13_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality13S212-617j08.p1k -176 51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19825529|allelePos=501|len=1001|taxid=9606|alleles='G/A'|mol=Genomic
 atttttgctt tggttgcctg agcttttgga ctattactca agaaatctgt tccaagagca
 atttcctgga gagtttccgt aatgttttct ttcagtagtt tcgtgtcttt gatttaagtc
 tttaacccat ttggatttga tttttgtata tagtgcaaga gaggtttcta gtttaactat
 tctgccaatg acttgggagg ccgaggtggg cggatcatgg gggcaggaga tcgagaccat
 cctggctaac acggtgaaac tctgtctcta ctaaaagtac aaaaaaaaat ttagccaggc
 gtggtggtgg gcacctgtac tcccagctac ttgggaggct gaggaggaga atggtgtgaa
 cccgggaggt ggagcttgca gtgagcccag atcgcgccac tgcactccag cctgagcaac
 agagctagac tccatctcaa aaaaaaaaaa aagctgacaa tgaatatcta gttttcccag
 cacaatttgt tgaagagact
 R
 tcctctcccc catgtatatt cttggcacct tcattgaaaa tgagttaatt gtaaatgtat
 ggatttattt ctgggttctc tattctgttc cattggtcta tgtgtctgtt ttatgccagt
 accatgctgt tttgtttata atttctctgt actataattt aaagtcaggt gatgtgattc
 ttccagtttt gttctttttg ctcaggatgg cttttggtat tctgggtctt ttatggtttc
 atgtaaattt taggattttt tttctatttc tgtgaagaga gttattagta tttcaatagg
 gattgcattg aatctgtaga ttgctttgtg aagtatgggt attttaacaa tatttactct
 tccaataaat gaacatggac tatctttcca ttttttttgg tgtcctcttt aatttttttg
 catctatgtt ttatagtttt cattgtagag atctttcact tcttctgtta tgtttattcc
 cagttatttt attttatttg

  Submitted Frequency for ss19825529 back to top
There is no frequency submission for ss19825529.


  dbSNP summary of Genotypes for ss19825529 back to top
No sufficient data to compute Hardy-weinberg probability for ss19825529.


  Submitted individual genotype for ss19825529 back to top
There is no individual genotype data for ss19825529.

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