NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss20613139           
Submitter
HandleSSAHASNP
Submitter SNP IDWGSA-200403-chr10.chr10.NT_030059.11_29058369
RefSNP(rs#)rs10884668
Submitted Batch IDWGSA-200403-chr10
Submitted DateMar 18, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 18 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWGSA-200403
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence positionAADD01110917.1 2227

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss20613139|allelePos=201|len=401|taxid=9606|alleles='G/T'|mol=Genomic
 AAATACAATA TTATACTTAC TGCTTGTAAT TTGGCATTAC AATAGACAAT CATGTAGGAT
 AGGAAGCTCT GTGCTGTAGG AATAAAGAGA ACCAAATTCC TGGCTCAGAT ATGGCACAAA
 CAAATTGTGA GACATTACAG TTTAACCAAG ATAGGTCTCC CATTAATTAC CTCATATGAA
 ATATGACAAG TTTGTATAAA
 K
 CAATCTGTTC TCCTTTAATA ACATGAGATC TCTGAAACAC AATTTAATAC ACGCATGTAT
 TATTAAAACA TTTATATTTA TTGGAATAAT GGTGTAAGTA AAGCTCTCGT CTAGTGTTTT
 GTATTCCGAA AGTCAAATAC GAATTTAATG CAAGAGTCAC ATCATTCCTG CCATAAACAA
 TACCTGAACA CTTTCCATTT

  Submitted Frequency for ss20613139 back to top
There is no frequency submission for ss20613139.


  dbSNP summary of Genotypes for ss20613139 back to top
No sufficient data to compute Hardy-weinberg probability for ss20613139.


  Submitted individual genotype for ss20613139 back to top
There is no individual genotype data for ss20613139.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement