NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss21300561           
Submitter
HandleSSAHASNP
Submitter SNP IDWGSA-200403-chr16.chr16.NT_010393.14_7604712
RefSNP(rs#)rs11639499
Submitted Batch IDWGSA-200403-chr16
Submitted DateMar 19, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 19 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWGSA-200403
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence positionAADD01147428.1 -2160

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss21300561|allelePos=379|len=879|taxid=9606|alleles='C/A'|mol=Genomic
 GATGACAAAA ATGAAAATCC TCCAAGATCC CTAAAGCACG GGAGGCATAA TAATGAATAA
 CATGCACGAA AACACCAGAT TAACACAGAT AACGGTGGTC ATCTGCCCAG TGCTCACCAT
 GTCGCAGGCA CTGTGCTAAA TGAACAGCCT TATCCTTTCC CGGGGTGCTC ACAGCCATGA
 ATGGTACCAA GCAGGCACTA CCATATTCAT TCCCTCTAAT GCCAggccag gtgcagtggc
 ctctgcctgt aatcccgcca ctctgggagg ctgaggtggg aggattgctt gatcccagga
 gttcgaaacc agcccgcgcg acatagtaag acccaagctc tacaaaatac tttaaaaaat
 tagccagggg gccgggtg
 M
 ggtgcctcac gtctataatc ccagcacttt gggaggccga ggtggacaga tcacctgagg
 tcaggaggtg gagaccagcc tggccaacat ggtgaaaccc tgtctctacc aaaaatacaa
 aaattagctg ggcatggtgg caggcacctg taatcccagc tacttgggag gctgaggcaa
 gagaatcgct taaacccagg aggcagaggt tgcagtgagc ccagatcaag ccattgcatt
 ccagtctggg caacaagagc aaaatccatt tcggggggga aaaaagaaaa aattagccag
 gcatggttgt ggtgcgcctg tggtcctagc tagctactgg ggaggctgag gtgggaggat
 taattgagta caggaggttg aggctgcagt gagccatgtt ggtgccactg cactctagcc
 tgggcaacag agcaagaccc tgtctttaaa aaaaaTTCTA TGGATAAATT GCTCTCTATT
 ATTCTCTCAC CAAGGAAAAT

  Submitted Frequency for ss21300561 back to top
There is no frequency submission for ss21300561.


  dbSNP summary of Genotypes for ss21300561 back to top
No sufficient data to compute Hardy-weinberg probability for ss21300561.


  Submitted individual genotype for ss21300561 back to top
There is no individual genotype data for ss21300561.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement