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Submitted SNP(ss) Details: ss21557906           
Submitter
HandleSSAHASNP
Submitter SNP IDWGSA-200403-chr2.chr2.NT_005079.12_1115198
RefSNP(rs#)rs7556675
Submitted Batch IDWGSA-200403-chr2
Submitted DateMar 20, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWGSA-200403
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence positionAADD01022105.1 1234

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss21557906|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic
 aaaaattagc tgggcgtggt gtcgcgcgcc tgtagtctca gctgctcagg aggctgaggc
 aggaggatct cttgaactca ggaggcagaa gttgcagtga gcagagatca cgccactgca
 ctccagcctg ggcaacagag caagactccg tctcaaaaaa aaaaaaaaaa aaaaCtgagg
 cctgctttct ccttattgct tatagtgaaa tgtgagaaga gatacactga aggtggaatt
 attcaacaaa aaggaaccag aacttgaaga tttggatcat tcttatactc acattgtaaa
 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaagagagag agaaagtatg ctctggagaa
 acactaagga tgtggacaac catttatttg caagagatta ggtgtgtggc ttatagaccc
 aatcacccat ctccacagaa acctggacag ttttgactag ggtacataga tgggatgaaa
 tgaaggaagg ctgttggact
 Y
 ccaggattcc acaggtagga aagggattgg caggggcagt tcagaggcca gtgaggctgc
 ttccgccacc acaggactga aagggacagg cttgggtttg aacccacggc caccacctcc
 tcagttctga gggtgcgggg ctgcaacccc agtgggccct gaggacagag gatcaagcca
 gtgaggatta ttctcaagcc ttaaaatcct gtcattggcc ctgttaggtg tcagactttc
 ttggcacctc caagtctttt tccttcccat ttctcccttt tggaatggaa tgtgtctatc
 ctctgcctat accattgtaa ttggaagcag ataacttgtc tgttctcatg ggttcataga
 tagaaagaaa atttgctcca acaggaaacc taacccagag tcaattgatg tggatgattt
 gggtgatgag atttgaactg atatttagat gatactggac tttgagttga tgctagaatg
 actgactttt gttgatgttg

  Submitted Frequency for ss21557906 back to top
There is no frequency submission for ss21557906.


  dbSNP summary of Genotypes for ss21557906 back to top
No sufficient data to compute Hardy-weinberg probability for ss21557906.


  Submitted individual genotype for ss21557906 back to top
There is no individual genotype data for ss21557906.

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