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Submitted SNP(ss) Details: ss21557907           
Submitter
HandleSSAHASNP
Submitter SNP IDWGSA-200403-chr2.chr2.NT_022184.13_46057843
RefSNP(rs#)rs7598533
Submitted Batch IDWGSA-200403-chr2
Submitted DateMar 20, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWGSA-200403
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence positionAADD01018969.1 3819

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss21557907|allelePos=484|len=720|taxid=9606|alleles='T/C'|mol=Genomic
 TTGCAGCCTA GCTTTGATGG TAAATGGTGG GAGTCAATTA GACACAACTA GTATAAATCA
 CTATGCAAGA TTGATATGAC ACCTGCACAA AGATAGGGCA AAGGGAGTTA CTTATTTTTG
 CACCTATTTT CAATACTGTA TCATATTGCT GTTTGCATTC ATACCCTGTA GGATATTTCT
 TTCTAAAGAT TCTTGCTTTT ggccaggcgt ggtggctcat gcctgtaatc ccagcacttt
 gggaggccaa ggcgggtgga tcatgaggtc aggaggcggg tggatcacga ggtcaggaga
 ttgagaccat cctggctaac atggtgaaac cccgtctcta ctaaaaatac aaaaaattag
 ccaggcgtgg gggcaggcac ttgcagtcac agctacttgg gaggctgagg caggagaatg
 gcatgaaccc tggaggcgaa gcttgcagtg agccgagatc gcgccactgc actacagcct
 ggg
 Y
 gacagaccga gactccatct caaaaaaaaa aaaaaaGATT CTTGCTTTCA CATACAGCTT
 TTTATATATC CCACAAAACC TACGAGAGTT GACTCTATGT GTGTGCATGT GCATGTGTAT
 GTATTGGGAG GGGAATGATA AAATAAATTT TTCTAGTTCA TAAAGAATAC GTAGGCATGA
 TAATAACAGA AGTGAGAGAA CATTTTCCCG ATGAAGTGCA ATACTGGCAA CATTGA

  Submitted Frequency for ss21557907 back to top
There is no frequency submission for ss21557907.


  dbSNP summary of Genotypes for ss21557907 back to top
No sufficient data to compute Hardy-weinberg probability for ss21557907.


  Submitted individual genotype for ss21557907 back to top
There is no individual genotype data for ss21557907.

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