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Submitted SNP(ss) Details: ss21557916           
Submitter
HandleSSAHASNP
Submitter SNP IDWGSA-200403-chr2.chr2.NT_005403.14_41348756
RefSNP(rs#)rs2582772
Submitted Batch IDWGSA-200403-chr2
Submitted DateMar 20, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWGSA-200403
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence positionAADD01026148.1 33790

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss21557916|allelePos=243|len=743|taxid=9606|alleles='C/T'|mol=Genomic
 TGATTCAGTA GTTCCCATTT AACAGAGCAC TAGTCAACTT TCATGTGGGT AGTTTGTACT
 GCAATAAAGT CATTTGGGTA ATGTATACGC TCATTATTTT TATTCCATTC CAATTCCCAC
 TTCTCTAGTC ATGACAACAT GCTCTTTCTA AAATACACTT TAAAACTTAA TTTTCTATTA
 TTCATTGTGT GTGGTGGGGG aattttccct ttacctttct gagttcttag ctgggactgc
 tc
 Y
 aacaagacag accaacaaga gaaaaacagt ttattaacat gtatacctca tgtatacaca
 gaagattatc cagggagaaa taaaaactct ccaagaggga gcctaaaact ccagcttaca
 tagcaacttc aactcgaaag gatgtgaagg aaggttacca caaaaagcat ggtaaataag
 agaaacgatt gttttgcaga tttatgttgt tatctctgtt gataggagtc tcttgcaatt
 tggtcatcct tctcttcccc agaaagggag acactcttac aaatagagat ttcctttcta
 ggtacacatt tctcttacaa aaaggtaact tgtgctgttt tcagagatga tcctgtatct
 gctggttctc aaaataatct gctcaaaata atcattatgc caaagtggca tatttagggt
 ggcatattgt ggtctcctat aatcaAAAAA CCCTCTCACT AGTAGCATCT TAAGAGCATT
 TTGAGAAACA CAAAAACAAT

  Submitted Frequency for ss21557916 back to top
There is no frequency submission for ss21557916.


  dbSNP summary of Genotypes for ss21557916 back to top
No sufficient data to compute Hardy-weinberg probability for ss21557916.


  Submitted individual genotype for ss21557916 back to top
There is no individual genotype data for ss21557916.

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