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Submitted SNP(ss) Details: ss21557920           
Submitter
HandleSSAHASNP
Submitter SNP IDWGSA-200403-chr2.chr2.NT_015926.13_3603629
RefSNP(rs#)rs2009753
Submitted Batch IDWGSA-200403-chr2
Submitted DateMar 20, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWGSA-200403
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence positionAADD01015816.1 17358

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss21557920|allelePos=467|len=873|taxid=9606|alleles='A/C'|mol=Genomic
 CAGCTCCTCC TGGATTTCAC CAGTCAGCAT CTATGGGCAC AAATGACAAC TTCGACTAAC
 ATTATTTGAC TCCTTCTCAT CTCTCACCTT CCGATGGAAC CATTGAGCTC AATGCAATGT
 TCTTTTCATT CAGAACACAG CTTAAGTCAA TGTGGAGTAA AAGCTGCAAG CATAACTCTT
 GCATTCGAAA ATCAACTTTg gccaggcgcc gtggctcaca cattttgaga ggctgaggcg
 ggcagatcac ctgagctcag gagttcaaga ccagcctggc caacatggtg aaaccccgtc
 tctactaaaa ttacaaaaat tagctgggca tggtggcagg cacctgtaat cccagctact
 ggggaggctg aggcaggaga aatgcttgaa cgcaggaggt ggaggttgca gtgagctgag
 attgtcccac tgcactccag cctgggtggt ggaacaagac cctatc
 M
 caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aAAAAATCAA CTTTAACTTG GTAATTCACC
 AACAATCCCT GTATGATGGC AGGAAGTCTC ACTCTGCTTC AGGCTGTCAG CTGGGAGGGC
 CATGGTTAAG TTAGTTAACC TATCTGAGCC TCCTTTTTTG TTTCATGTTG TGTTGTGTTT
 TCATTTGAAA AATGGGGACG AATGTATTCT TTGCATATCT ACTCATGTTG TTTTGATGTT
 CAAAGAAGAT AAAATGGAAG TACTTTGTAA ACCATAAAGC AGATAGATTG AGACAGGATG
 GGGCTATCAT TCAGTTGCTC CCCAAGCCAA ATATGCCCCT CAATACGTTC TCACAGATGT
 GCATACTTCC TATCTCTTCT GCAAAGTCCA GTACAGACTA ATTTTC

  Submitted Frequency for ss21557920 back to top
There is no frequency submission for ss21557920.


  dbSNP summary of Genotypes for ss21557920 back to top
No sufficient data to compute Hardy-weinberg probability for ss21557920.


  Submitted individual genotype for ss21557920 back to top
There is no individual genotype data for ss21557920.

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