Submitted SNP(ss) Details: ss217405761

Submitted SNP(ss) Details: ss217405761

Submitter
Handle	1000GENOMES
Submitter SNP ID	pilot_3_LWK_8_chr1_1110357
RefSNP(rs#)	rs74046642
Submitted Batch ID	pilot_3_LWK_mar_2010
Submitted Date	Apr 09, 2010
Publication Cited	N.D.
First entry to dbSNP	Apr 9 2010 12:00:00:000AM

Resource Links
GenBank Accession	NC_000001
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	EXON_CAPTURE_SEQUENCING
Ascertainment Samplesize	216
Population	N.D.

Allele
Observed Allele	G/A
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	N.D.

Validation
Validation Status	Not Validated
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	population count: 1
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment
depth.cov:1846

Fasta sequence (Legend)

 GGACAGGCCC TCCGGACAGT CTGGGAGCCA GTCTCCAGGC ACCGTGTGCC CCCAGTTCAT
 GCAGAAGAAG AGCCCTCTGT ACATGCTGCT GAAGGAGCAC ACGGTGTGGA GCATGGAACA
 CCTCAACCGC TACATCAGTG ACACGTTCTG GAAGGCCCGG GGCCTCGCCA AGGACTGGGT
 CTTCACCACC CTCAAGGTGC
 R
 TCCACTGTGC CCTCCAGTCT GGGAGTGAGA TCCCTCGGGG CGGGGGTGTG TGGTCAGGCT
 GGGCACCAGG CACACAGATG TCCGTGGCGT GCGTGGGCGG CTGCGCTGAA GTGTGACCTG
 ACCGTGTGGA ACCAAACCCT TCCAGCGTCT CTGCTCACTT AGCTGGCAGT GCCTGTCCCC
 AGCAGCCAGC AAAGGCCCGG

Submitted Frequency for ss217405761

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
pilot_3_LWK_exon_capture_panel - WEST AFRICA	216	G=0.99536997	A=0.00463000				pilot_3_LWK_mar_2010	1000GENOMES

dbSNP summary of Genotypes for ss217405761

No sufficient data to compute Hardy-weinberg probability for ss217405761.

Submitted individual genotype for ss217405761

There is no individual genotype data for ss217405761.

Disclaimer Privacy statement