NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss21837494           
Submitter
HandleSSAHASNP
Submitter SNP IDWGSA-200403-chr22.chr22.NT_011519.10_1189263
RefSNP(rs#)rs5992734
Submitted Batch IDWGSA-200403-chr22
Submitted DateMar 20, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWGSA-200403
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence positionAADD01173245.1 4743

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss21837494|allelePos=484|len=715|taxid=9606|alleles='A/G'|mol=Genomic
 TTGAGAATGC AGAGGCTTTT ATTCGTGGAC TCACATCACT GCATAGGCAC AAAGAATGTG
 ATTGCCATTT GCTGCGTGAG AAAAAGCTGG GCTCCCTATT TCTTTTTTGG GTTGGACTCT
 GCCGTGCAGC CATAGGACAC CAAGCCTCAC GCACTCTCCC CTTGGGACAG TAGTGTTTGG
 GTGAATGTTA CTGCATCCCG TTTTTTTTCt tttctttttt tttttttttt tttttttgag
 acgaaatctt gctcttgtcc cccagactgg agtgcaatgg cacgatctcg gctcactgca
 acctccacct cccaggttca agggattcgt ctgcctcggc ctcccaagta gctgggacta
 caagcgcgca ccaccactcc cagctaattt ttgtattttt agtagaggcg gggtttcacc
 atgttggcca ggctggtctc aaactcctga cctcaggtga tccacccgcc ttggcctccc
 aac
 R
 tgctgggatt acaggcgtga gccaacacac cggaccTTCA TTTTTTAAAT TAAGCTGGGA
 CACAAGTTTT GCCTCCAGGC TGGATGTTGA TCCTGCTCTG TGCTAGACAG ATGTGCGGAG
 GGACTGTTCC GGGCTCGGCT TGACCTTTTC CTACCTAGTT TCTCCCTCTT GTCCTGCACA
 AGAGGACTAA CTGAACTCTA ACGTCAGAAC GGCTGACGAG CAGTTGATTG T

  Submitted Frequency for ss21837494 back to top
There is no frequency submission for ss21837494.


  dbSNP summary of Genotypes for ss21837494 back to top
No sufficient data to compute Hardy-weinberg probability for ss21837494.


  Submitted individual genotype for ss21837494 back to top
There is no individual genotype data for ss21837494.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement