NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss21837496           
Submitter
HandleSSAHASNP
Submitter SNP IDWGSA-200403-chr22.chr22.NT_011525.5_302814
RefSNP(rs#)rs2688069
Submitted Batch IDWGSA-200403-chr22
Submitted DateMar 20, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWGSA-200403
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence positionAADD01175418.1 33375

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss21837496|allelePos=501|len=1001|taxid=9606|alleles='C/A'|mol=Genomic
 TCGCTTTATG ATTTGAGTTC CTAGGAAATT CAGATTTTTA TTTTTTAAAG TACACAGCAC
 AATCAATGTT TATAAATTCA GTTGTTCCCT AATTTATTAA TTTCTTCTTT CATCCTTATT
 ATTCCCTTCC TCCTGATTTA TTCAGTATTT TCCATTATTT CCCTAAGTTT CTCAATTGAC
 AGGATATTAA TATACTGTTT TCTTTTCATC TTAAGGCTGT GAATGTACCT TAAAGTATAC
 CTTTGGCCAA TTATCACATT TTATATGTTG TTAGAATAAA TATCCAGAAA TGCTCTATTA
 GCCGTATACA CACAATCATG ACAGAAAAAA TAGTACTTCC CTGACCAGTT ATTTGAACTA
 ATGTTACTGA AGTTTTTACC CTTCCCATGG AAAACAAACT TTGAGATTGT GTTACTAAAC
 TCCTCATTAA TTTTACTGTT AGATACATTG ATCAATGTGT TTTGATAATT TCTTGACATT
 TTCTTTATGG CCTAGTATCA
 M
 CTTTTGTGAG CTTCCCATCC ATGTTTGACT AGTCATTTTC TTCAAATATA TAGTATAAAA
 CTCTATATTT AGATACATTT ATCAACGTAT GTTTTGATAA TTTCTTGACA TTTTCTTTAT
 GGCCTAGTAT CAACTTTTGT GAGCTTCCCA TCAATGTTTG ACAAGTCATT TTATTCAGAT
 ATATAGTATA AAACTCTATC TGTATGCGAA TATTGATGTG TAGGTATTTA CTTACGTGTT
 TGGTCCCATA TATTATAGAA TGATCCATGT AATGTGTTAT CATCATTTAC TTTCATTTTT
 ATTGAGTCAT CATTGCATGC CAAGAGTTTT TACTGTGATT TACATTTGTT TTTTCAAGTG
 TTTTTTACAG CTCTTCTGTG TGTTTAGATA TTTTATGATG TGACATGGAA ATGTTTCTTT
 TTTAAAACAT AGATTCTGTC TTCTATCCAT GAGAAATAAT CATCGCTTTT CTTTTTACAG
 CTCTGCTTTC TCTATTTTGT

  Submitted Frequency for ss21837496 back to top
There is no frequency submission for ss21837496.


  dbSNP summary of Genotypes for ss21837496 back to top
No sufficient data to compute Hardy-weinberg probability for ss21837496.


  Submitted individual genotype for ss21837496 back to top
There is no individual genotype data for ss21837496.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement