NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss21867470           
Submitter
HandleSSAHASNP
Submitter SNP IDWGSA-200403-chr3.chr3.NT_022517.16_52849408
RefSNP(rs#)rs11713479
Submitted Batch IDWGSA-200403-chr3
Submitted DateMar 20, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWGSA-200403
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence positionAADD01032921.1 88502

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss21867470|allelePos=501|len=1001|taxid=9606|alleles='T/C'|mol=Genomic
 GGGTTCCAGA CCCAAAGACA GGCGCCTTCA CTCGTGAGCT CCAGCTCCAA TTCAGCTGTC
 ACTGTATTCT GTTATTTTAC CAGGAGGAGG TGatcactgg gtgaaaggct actgggaaac
 agagtattca catgatctca aagtattatc actgcagaga tcccttatta attgcccagg
 ggaagatgta cctttacgag ggagagactg agaggtcttc catccaccat caccaagtca
 tcaaccttat taacactaat agtggggcag cgtgatgtca catgcctcct ggtggaatgt
 acatgaaaca tacagcgccg cttatggcgt gttcttgcca taaaactggg tatctgaatc
 taatAACTGC TCCAGACCAA ACTCAGGAAA ACAGGGGCCA GTGAAACAAT TCAAACacca
 caaggaaaca cccagacaac tccagaatgt ggggcactcc acacaacaag cagccagaac
 tcttcaaaaa gccagaaaca
 Y
 tgaaaaaaaa aaaaaagtgt gcatgtatgt gtaggaggag gttcttctag aaacgaaagt
 gactgaaaac gtaaccagac acaacgtgtg gaccttgatt ggatcttagc ttttaaaaac
 tccagctata aaagacttgt gacatttggg gaaatgtgac tatggactgg atatgagatg
 atatcatgga gttattatta attctcttaa gtatgatgat gaaattgtgg ttatgtggga
 gattgtcctt attttgggga gacttagctg aagtatttag cagtaaagtg tgatgctggt
 cacaatttac cttcaaatgg ctcagccaaa aaaaaaaaag cataaagagg taaagcaaat
 gtgacaaaat gtgaacaact gctaaatcta ggtagagggc agacagatgt tcagtgtatt
 atttttcatg ttttctacgt ttgacatttt tagagataaa aaCCAGGATG GGGTGGGGAG
 AGGTGATCGT AGGGAAGGTT

  Submitted Frequency for ss21867470 back to top
There is no frequency submission for ss21867470.


  dbSNP summary of Genotypes for ss21867470 back to top
No sufficient data to compute Hardy-weinberg probability for ss21867470.


  Submitted individual genotype for ss21867470 back to top
There is no individual genotype data for ss21867470.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement