NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss22036440           
Submitter
HandleSSAHASNP
Submitter SNP IDWGSA-200403-chr4.chr4.NT_006316.15_16377023
RefSNP(rs#)rs7653901
Submitted Batch IDWGSA-200403-chr4
Submitted DateMar 20, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWGSA-200403
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence positionAADD01043928.1 182

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss22036440|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic
 AGAAATATTT TACGGCTGGG CGCGGTGGCT CACTCCTGTA agcagacttc agggagaaag
 caggttgtaa aatgtttctt TTgctgggca cagtggctca tgcctgtaat cccagcactt
 tgggaggctg aggcgggtgg atcacgaaat caggagtttg agaccagcct ggccaacatg
 gtgaaaccca gtctctacta aaaatacaaa aattagccag gtgtggtggc atgtgcctgt
 aatctcagct actcaggagg ctgaggcagg agaatcactt gaacccagga ggcggaggtt
 gcagtgagcc gatcttgcgc cactgccctc cagcAcccga gtagctggga ctacaggcgt
 gtgccaccat gtccagttaa tttttgtatt tttagtagag atgaggcttc accaagttag
 ccaggatggt ttcgatctct tgaccttgtg atccacccgc ctcagcctcc caaagtgctg
 ggattacagg catgaaccac
 Y
 gcgcccggGg aaaagaaaca ttttacaacc tgctttctct ctgaagattg atatctgaga
 gattcctcta cacagtaaaa cttggtctcc acaatccttt atcttaactt gaacattcct
 ttccatagat cccaggtctt cagataaact caaccaattg tcaaccagaa aatgtttaaa
 tttacctata gcctgaaagc ccctgctttg agttgtccca cctttctgaa ccaaaccaat
 gtatttctta aatgtatttg actgatgtct catgcctccc taaaatatat aaaaccaagc
 tgtgccccaa ccaccgtggg cacatgttct caggacctcc tgagggctgt gtcatgggcc
 atggtcactc atatttggct cagaataaat ctcttcaaat attttacaga ctttgattct
 tttcatagac aCtttctttc tctctctttt ttttaattga gatggagtct cagtctgttg
 cccaggctgg agtgtaatgg

  Submitted Frequency for ss22036440 back to top
There is no frequency submission for ss22036440.


  dbSNP summary of Genotypes for ss22036440 back to top
No sufficient data to compute Hardy-weinberg probability for ss22036440.


  Submitted individual genotype for ss22036440 back to top
There is no individual genotype data for ss22036440.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement