NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss22217989           
Submitter
HandleSSAHASNP
Submitter SNP IDWGSA-200403-chr5.chr5.NT_023133.11_12172673
RefSNP(rs#)rs32420
Submitted Batch IDWGSA-200403-chr5
Submitted DateMar 21, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 21 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWGSA-200403
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence positionAADD01065582.1 3546

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss22217989|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 CCAGCTCATG TTCTGTATCT CTACCCAATA TGTTGCCGAG CTGTGAGCAC CCTTAGGCTT
 CCATCTAAAT AATTTTTAAA CTTTTTATTT CTTTTACCAC TTTGCACTTT TTGTTCCCAG
 AATGAACCCC TTCTACTATT GGAAATTTCC TAAGACAAAC AAGTTTCTCT TCCTGGGTAG
 CAATTTCCAT TGATGAAAAA
 Y
 CGCCTTGTAT GCAGTCAGGA AGTAGAGCAG GTTGGGAAGG TCTGTAATTT GTTTCCCATC
 AACTAATAAT CTTATTGTGA TGAGTAATGT AGTCCTGTTA ATGTCTCAAC AAGGTTATGG
 ATTGTGCTGA GTGTCAGTAG AGAAGCCGAC AGCTTTGTAC AGTGAAACCA TTCATTCTCC
 TTTCTACACA GTATAGTTTC

  Submitted Frequency for ss22217989 back to top
There is no frequency submission for ss22217989.


  dbSNP summary of Genotypes for ss22217989 back to top
No sufficient data to compute Hardy-weinberg probability for ss22217989.


  Submitted individual genotype for ss22217989 back to top
There is no individual genotype data for ss22217989.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement