NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss22218000           
Submitter
HandleSSAHASNP
Submitter SNP IDWGSA-200403-chr5.chr5.NT_034772.5_5311765
RefSNP(rs#)rs11737902
Submitted Batch IDWGSA-200403-chr5
Submitted DateMar 21, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 21 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWGSA-200403
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence positionAADD01061322.1 22133

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss22218000|allelePos=418|len=618|taxid=9606|alleles='T/A'|mol=Genomic
 AAAGGCAGAG ACTTTATAAG TTTCACAGGA AAACAGttta ttgtttgacc ttgcacaatt
 aattctgtaa tccatctagg atctattttt gttcatggca tgaggtaggg gtcaagatac
 ttttttaccc aatgcataat ccatattact ccgtattatt cttgaaatta ccatctttgt
 cctactacac tgagacaaat attgtcacaa atcagatgat catatatttt tggttctatt
 attggacagt tctGTTGGTC ACTTTGTTGT CCTTGAATCA GAGCAGCTTT TAAAACTCAT
 TAACTTTATC TGCTTTGTCA CCTTTTTGTT TCGGTGGGGT AAACCCTGAA ATAATTGTTC
 CATACCTCTT AAATATTGCC TAATCATGGA CTGCAGATGA TAGAGCACAC ACTGAGC
 W
 TTTTTTGTCT TTTTTTTTTT TTGGCGGCGG GGGATGGTGA AAATGGTTCA TGATTCAACT
 GTCTGTGAAC TTCTCAAAGT ATTTTTTTTT AAGGTATAAT TCTTCTTTCT ATGAAATGCT
 ATTAAGAAAA GATTTGGGAT TCTAACAACA TTTCTATCAT TCTAAGCAAT AAGATTTTTA
 AGCTAAAAAG ACAGAAAGGT

  Submitted Frequency for ss22218000 back to top
There is no frequency submission for ss22218000.


  dbSNP summary of Genotypes for ss22218000 back to top
No sufficient data to compute Hardy-weinberg probability for ss22218000.


  Submitted individual genotype for ss22218000 back to top
There is no individual genotype data for ss22218000.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement