NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss22782907           
Submitter
HandleSSAHASNP
Submitter SNP IDWGSA-200403-chr9.chr9.NT_008470.16_18819027
RefSNP(rs#)rs6478076
Submitted Batch IDWGSA-200403-chr9
Submitted DateMar 21, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 21 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWGSA-200403
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence positionAADD01102573.1 419

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss22782907|allelePos=422|len=922|taxid=9606|alleles='G/A'|mol=Genomic
 CTGGGAGCGC ACCAATCACC GAAAGGCCGC CGCCACGGCC CGCCCCCAGG AACTCGGACA
 TAGGGAGCGC AAACCCTGCT GCAGGATGAA AATCTCAGAC CTGGGAGGCT GTGTGTGCCT
 ACTGCAATCA GCCCCACCGC AGACCCGGAG ATCGAGGCCC GGTCTGCGGA GGGTAAGGCA
 TTTACGCAAG ATCGCACAGA gtggctcacg cctgtaatcc cagcactttg ggaggccggg
 cagatcacct gaggtcagga gttcgagact agcctggcca acatggtgac cgtcccccca
 cccccaccag tctctactaa aactacaaaa attagctggg cgtggtggcg catatctgta
 atcccagcta cttgggaggc tgaggcacga gaatcgcttg aacttgggag gcggaggttg
 c
 R
 gtgagccaag attgcgtcac tgcactccag cctgggcgac agagcaaggc tccatcaaaa
 aaaaaaaaag aaagaaaaaa gaaaaaAGAA AAAAAAAAGA TCGCACAGAG CCACAGTGAG
 GAGGAAATCA CAAACTTCCA TGGCTGAAAC GGCCTGCTTA GTAACAGTAA TAATAAACTT
 TTCTTGATCA CAAATTATGG GTCAGACCTG TTGGAAGCTC TTCTGCTGTT CAGTCGTCTC
 CTATGAGGTA GGTAGGTATT ATCACCACCG CCCCCAAGTA TATTCTTGTC CAACTCCCCA
 TCAGGCAAGC ATGGAAACCC AGCCCGAAGA CGGACAAGAA CTTTTCCAAG GTCCCGCTGT
 GAGTGCAGCA CAGACATCAT ACCTTGTCCA CCACACACAC ACCTTGAAGG ATGCACGGTG
 TCCAACTCAC CTGGGCTCTT TGCCCCAGCT CTGCCACTTG CTGCCAGTGA GCCTCAGGCA
 AATGGGATTC ATACCCACAT

  Submitted Frequency for ss22782907 back to top
There is no frequency submission for ss22782907.


  dbSNP summary of Genotypes for ss22782907 back to top
No sufficient data to compute Hardy-weinberg probability for ss22782907.


  Submitted individual genotype for ss22782907 back to top
There is no individual genotype data for ss22782907.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement