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Submitted SNP(ss) Details: ss22888166           
Submitter
HandleSSAHASNP
Submitter SNP IDAACC-200403.chr7.NT_007741.12_2999650
RefSNP(rs#)rs6942394
Submitted Batch IDAACC-200403
Submitted DateMar 22, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 22 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodAACC-200403
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityAACC01000009.1 2990244 40

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss22888166|allelePos=201|len=701|taxid=9606|alleles='C/T'|mol=Genomic
 GGAGGCCACT GCTTTGCTGC ACAGGGACGT CCAAGGACCA AGGCACAGAG CAGCTGGGGG
 GCTCCCCAGG GAGGAAGGAC AGCACTCAGC CCCCTCCCCT GCAGGTCCCT CAGAGACCCA
 AGGCCCAGCT GGGCCCCACC ATCCTCGACC CCCCAAGTCT TCCTCCTTGC TGTGGCCACA
 CAGAAACTGT AATTTTAGGA
 Y
 GAGAGCTCTG CCAGACAGAG GTGAAGAGGC AGGAATTGTG TGGGGTCCAG AGGAACCAGA
 Gtgtgatggt taacactgag tgtcaacttg attggattga aggatggaaa gtattgatcc
 tgggtgtgtc tgtgagggcg ttgccgaagg agattcacat ttgggtcagt ggactgggag
 gggcagaccc accctcagtc tgggtgggca ccatctaatc agtcgctggc atggccagaa
 tataaagcag gcagaatatc gtgacaagac tagactggcc tagcctccca gcctacatct
 ttctcccatg ctggatgctt cttgcccttg aacattggac tccaagttct tcagccttgg
 gacctggact ggctctcctt gcagacagcc tattgtggga ccttgtgatc atgtgagtta
 atacttagta aactcccctt tatatatata tacacacata cacacacaca cacacacaca
 catatatata cctataAAGT

  Submitted Frequency for ss22888166 back to top
There is no frequency submission for ss22888166.


  dbSNP summary of Genotypes for ss22888166 back to top
No sufficient data to compute Hardy-weinberg probability for ss22888166.


  Submitted individual genotype for ss22888166 back to top
There is no individual genotype data for ss22888166.

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