Submitted SNP(ss) Details: ss23145065

Submitted SNP(ss) Details: ss23145065

Submitter
Handle	PERLEGEN
Submitter SNP ID	afd1130677
RefSNP(rs#)	rs4657644
Submitted Batch ID	AFD_AFR_18-MAY-2004
Submitted Date	Aug 20, 2004
Publication Cited	N.D.
First entry to dbSNP	Aug 10 2004 12:00:00:000AM

Resource Links
GenBank Accession	NC_000001.5
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	AFD_CHIP_HYB
Ascertainment Samplesize	46
Population	AFD_AFR_PANEL

Allele
Observed Allele	T/G
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 3
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 ACGCCATGGT CATACAACGG CGATATGTAG CCTGGGTGTC ACTCACTGAG ACACATTTCC
 TCCCTCCACC CCCACCCATC TTTCTTAA
 AATTTAGCAT TT
 K
 CTGGACAAGA TC
 AGGCTTACTA TAAGACAGTG CTTAGAAAAA CTGATGTTAA GATGGAAAAA ATAAGGGAAG
 GAGAGGGAAG AAAAGGTGGG AAAGAGAT

Submitted Frequency for ss23145065

There is no frequency submission for ss23145065.

dbSNP summary of Genotypes for ss23145065

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
AFD_EUR_PANEL - NORTH AMERICA	48	48	T=0.91666669	G=0.08333334	T/T=0.83333331 G/T=0.16666667	Pr(chiSq=0.032,df=1) =1.000	Genotype Freq.
AFD_AFR_PANEL - NORTH AMERICA	46	46	T=0.69565219	G=0.30434781	T/T=0.47826087 G/T=0.43478259 G/G=0.08695652	Pr(chiSq=0.017,df=1) =1.000	Genotype Freq.

Submitted individual genotype for ss23145065

There is no individual genotype data for ss23145065.

Disclaimer Privacy statement