>gnl|dbSNP|ss23145072|allelePos=101|len=201|taxid=9606|alleles='T/C'|mol=Genomic
AAGCAATGAC CCAGCACCTC AGGAATTACC TTACTATCTG CCCCATTTCT CATATTATTT
GTAAGTGCCA GCCAGCTAGA ACCCTATA
CCCAGAAACA TA
Y
CCCAAAAGGA AG
CCAGGAAGGT CTTTTTTTTT TTTTTTTTTT TTTTTTTTGA GACACAGTCT TGCTCTGTCA
CCCAGGCTGG AGTGCAGTGG TGCGCTCT
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | AFD_EUR_PANEL
- NORTH AMERICA | 48 | 48 | T=0.83333331
| C=0.16666667 | T/T=0.66666669
C/T=0.33333334
| Pr(chiSq=0.293,df=1)
=0.655 | Genotype
Freq. |
AFD_AFR_PANEL
- NORTH AMERICA | 46 | 46 | T=0.76086956
| C=0.23913044 | T/T=0.60869563
C/T=0.30434781
C/C=0.08695652
| Pr(chiSq=0.616,df=1)
=0.439 | Genotype
Freq. |
AFD_CHN_PANEL
- NORTH AMERICA | 48 | 48 | T=0.77083331
| C=0.22916667 | T/T=0.66666669
C/T=0.20833333
C/C=0.12500000
| Pr(chiSq=4.041,df=1)
=0.050 | Genotype
Freq. |
| HapMap-CEU | 220 | 220 | T=0.88181818
| C=0.11818182 | T/T=0.77272725
C/T=0.21818182
C/C=0.00909091
| Pr(chiSq=0.241,df=1)
=0.655 | Genotype
Freq. |
HapMap-HCB
- EAST ASIA | 84 | 84 | T=0.77380955
| C=0.22619048 | T/T=0.61904764
C/T=0.30952382
C/C=0.07142857
| Pr(chiSq=0.563,df=1)
=0.479 | Genotype
Freq. |
| HapMap-JPT | 172 | 172 | T=0.66279072
| C=0.33720931 | T/T=0.45348838
C/T=0.41860464
C/C=0.12790698
| Pr(chiSq=0.347,df=1)
=0.584 | Genotype
Freq. |
| HapMap-YRI | 224 | 224 | T=0.82589287
| C=0.17410715 | T/T=0.69642860
C/T=0.25892857
C/C=0.04464286
| Pr(chiSq=1.112,df=1)
=0.294 | Genotype
Freq. |
| HAPMAP-ASW | 98 | 98 | T=0.74489796
| C=0.25510204 | T/T=0.63265306
C/T=0.22448979
C/C=0.14285715
| Pr(chiSq=8.209,df=1)
=0.005 | Genotype
Freq. |
| HAPMAP-CHB | 82 | 82 | T=0.84146339
| C=0.15853658 | T/T=0.68292683
C/T=0.31707317
| Pr(chiSq=0.425,df=1)
=0.527 | Genotype
Freq. |
| HAPMAP-CHD | 170 | 170 | T=0.77647060
| C=0.22352941 | T/T=0.58823532
C/T=0.37647060
C/C=0.03529412
| Pr(chiSq=0.607,df=1)
=0.439 | Genotype
Freq. |
| HAPMAP-GIH | 176 | 176 | T=0.93181819
| C=0.06818182 | T/T=0.87500000
C/T=0.11363637
C/C=0.01136364
| Pr(chiSq=0.983,df=1)
=0.343 | Genotype
Freq. |
| HAPMAP-LWK | 178 | 178 | T=0.75842696
| C=0.24157304 | T/T=0.56179774
C/T=0.39325842
C/C=0.04494382
| Pr(chiSq=0.477,df=1)
=0.527 | Genotype
Freq. |
| HAPMAP-MEX | 100 | 100 | T=0.82999998
| C=0.17000000 | T/T=0.69999999
C/T=0.25999999
C/C=0.04000000
| Pr(chiSq=0.309,df=1)
=0.584 | Genotype
Freq. |
| HAPMAP-MKK | 286 | 286 | T=0.79720283
| C=0.20279720 | T/T=0.61538464
C/T=0.36363637
C/C=0.02097902
| Pr(chiSq=2.221,df=1)
=0.150 | Genotype
Freq. |
| HAPMAP-TSI | 176 | 176 | T=0.83522725
| C=0.16477273 | T/T=0.68181819
C/T=0.30681819
C/C=0.01136364
| Pr(chiSq=1.158,df=1)
=0.294 | Genotype
Freq. |
