Submitted SNP(ss) Details: ss24235115

Submitted SNP(ss) Details: ss24235115

Submitter
Handle	PERLEGEN
Submitter SNP ID	afd0555974
RefSNP(rs#)	rs2023495
Submitted Batch ID	AFD_EUR_18-MAY-2004
Submitted Date	Aug 21, 2004
Publication Cited	N.D.
First entry to dbSNP	Aug 10 2004 12:00:00:000AM

Resource Links
GenBank Accession	NC_000001.5
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	AFD_CHIP_HYB
Ascertainment Samplesize	48
Population	AFD_EUR_PANEL

Allele
Observed Allele	G/A
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 3
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 TATTTTGACT CTTGCACAAT CCCGCATTCC TAGAGCAAAA TAGTCGTCTT TTCCTCCATA
 TGTCTTCCTC AGGACAATTG AGAGGATT
 TAGTTAGAGT AT
 R
 CAATCCCAGC AA
 CTATAGGGCA GCTTTAGTTG CTCCATGAGT ATTTTAAGGA TTGAACAAGA GATGCTTACT
 TTTGGGCTGT TCTTATACTT TTTTGATC

Submitted Frequency for ss24235115

There is no frequency submission for ss24235115.

dbSNP summary of Genotypes for ss24235115

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
AFD_EUR_PANEL - NORTH AMERICA	48	48	G=0.60416669	A=0.39583334	G/G=0.45833334 A/G=0.29166666 A/A=0.25000000	Pr(chiSq=3.654,df=1) =0.100	Genotype Freq.
AFD_AFR_PANEL - NORTH AMERICA	44	44	G=0.93181819	A=0.06818182	G/G=0.86363637 A/G=0.13636364	Pr(chiSq=0.016,df=1) =1.000	Genotype Freq.
AFD_CHN_PANEL - NORTH AMERICA	48	48	G=0.60416669	A=0.39583334	G/G=0.41666666 A/G=0.37500000 A/A=0.20833333	Pr(chiSq=1.119,df=1) =0.294	Genotype Freq.

Submitted individual genotype for ss24235115

There is no individual genotype data for ss24235115.

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