Submitted SNP(ss) Details: ss24235140

Submitted SNP(ss) Details: ss24235140

Submitter
Handle	PERLEGEN
Submitter SNP ID	afd0556317
RefSNP(rs#)	rs11163687
Submitted Batch ID	AFD_EUR_18-MAY-2004
Submitted Date	Aug 21, 2004
Publication Cited	N.D.
First entry to dbSNP	Aug 10 2004 12:00:00:000AM

Resource Links
GenBank Accession	NC_000001.5
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	AFD_CHIP_HYB
Ascertainment Samplesize	48
Population	AFD_EUR_PANEL

Allele
Observed Allele	A/G
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 3
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 GATTGATTAT GGAAATCTAT TTTTGAATAA TGAAAAATAT TTGAATCTTC TCAGAGACTA
 TCACTTAATA ATGGTACTTT CTGAATTT
 AAAGCTCTGA TG
 R
 ATTTGATTTA CT
 AATATCTTTC ACTTTGTATC TCTCTATCTA TAACCTAAAT TTGTCTGTAG ATTGCTGTAT
 CTTTTTTTGT TCTGTTTATT TAATATTT

Submitted Frequency for ss24235140

There is no frequency submission for ss24235140.

dbSNP summary of Genotypes for ss24235140

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
AFD_EUR_PANEL - NORTH AMERICA	48	48	A=0.85416669	G=0.14583333	A/A=0.70833331 A/G=0.29166666	Pr(chiSq=0.189,df=1) =0.752	Genotype Freq.
AFD_CHN_PANEL - NORTH AMERICA	48	48	A=0.91666669	G=0.08333334	A/A=0.83333331 A/G=0.16666667	Pr(chiSq=0.032,df=1) =1.000	Genotype Freq.

Submitted individual genotype for ss24235140

There is no individual genotype data for ss24235140.

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