NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss275679856           
Submitter
HandleGMI
Submitter SNP IDGMI_AK_SNP_16
RefSNP(rs#)rs11580262
Submitted Batch ID2009AK_SNP
Submitted DateDec 16, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodDIRECT DNA SEQUENCING
Ascertainment Samplesize2
PopulationAK_Koreans
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Chromosome-1

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss275679856|allelePos=501|len=1001|taxid=9606|alleles='A/G'|mol=Genomic
 AGCAGCTTGT CCTGGCTGTG TCCATGTCAG AGCAACGGCC CAAGTCTGGG TCTGGGGGGG
 AAGGTGTCAT GGAGCCCCCT ACGATTCCCA GTCGTCCTCG TCCTCCTCTG CCTGTGGCTG
 CTGCGGTGGC GGCAGAGGAG GGATGGAGTC TGACACGCGG GCAAAGGCTC CTCCGGGCCC
 CTCACCAGCC CCAGGTCCTT TCCCAGAGAT GCCTGGAGGG AAAAGGCTGA GTGAGGGTGG
 TTGGTGGGAA ACCCTGGTTC CCCCAGCCCC CGGAGACTTA AATACAGGAA GAAAAAGGCA
 GGACAGAATT ACAAGGTGCT GGCCCAGGGC GGGCAGCGGC CCTGCCTCCT ACCCTTGCGC
 CTCATGACCA GCTTGTTGAA GAGATCCGAC ATCAAGTGCC CACCTTGGCT CGTGGCTCTC
 ACTGCAACGG GAAAGCCACA GACTGGGGTG AAGAGTTCAG TCACATGCGA CCGGTGACTC
 CCTGTCCCCA CCCCCATGAC
 R
 CTCCCCAGCC CTCCAAGGCC ACTGTGTTTC CCAGTTAGCT CAGAGCCTCA GTCGATCCCT
 GACCCAGCAC CGGGCACTGA TGAGACAGCG GCTGTTTGAG GAGCCACCTC CCAGCCACCT
 CGGGGCCAGG GCCAGGGTGT GCAGCACCAC TGTACAATGG GGAAACTGGC CCAGAGAGGT
 GAGGCAGCTT GCCTGGGGTC ACAGAGCAAG GCAAAAGCAG CGCTGGGTAC AAGCTCAAAA
 CCATAGTGCC CAGGGCACTG CCGCTGCAGG CGCAGGCATC GCATCACACC AGTGTCTGCG
 TTCACAGCAG GCATCATCAG TAGCCTCCAG AGGCCTCAGG TCCAGTCTCT AAAAATATCT
 CAGGAGGCTG CAGTGGCTGA CCATTGCCTT GGACCGCTCT TGGCAGTCGA AGAAGATTCT
 CCTGTCAGTT TGAGCTGGGT GAGCTTAGAG AGGAAAGCTC CACTATGGCT CCCAAACCAG
 GAAGGAGCCA TAGCCCAGGC

  Submitted Frequency for ss275679856 back to top
There is no frequency submission for ss275679856.


  dbSNP summary of Genotypes for ss275679856 back to top
No sufficient data to compute Hardy-weinberg probability for ss275679856.


  Submitted individual genotype for ss275679856 back to top
There is no individual genotype data for ss275679856.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement