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Submitted SNP(ss) Details: ss2788465708           
Submitter
HandleGNOMAD
Submitter SNP IDrs28729284
RefSNP(rs#)rs28729284
Submitted Batch IDgenome_batch_chr3
Submitted DateMay 18, 2017
Publication CitedN.D.
First entry to dbSNPMay 18 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2788465708|allelePos=26|len=51|taxid=9606|alleles='C/G'|mol=Genomic
 GGCCTTCTTA GAACTTTCTT GGTGT
 S
 CTGCTATGAC ATAAAGCTCT TGAGC

  Submitted Frequency for ss2788465708 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
EAS1622C=1.00000000
G=0.00000000
gnomad-EASGNOMAD
OTH980C=0.99795920
G=0.00204082
gnomad-OTHGNOMAD
FIN3494C=1.00000000
G=0.00000000
gnomad-FINGNOMAD
AMR838C=0.99761337
G=0.00238663
gnomad-AMRGNOMAD
MALE17108C=0.99234277
G=0.00765724
gnomad-MALEGNOMAD
ASJ302C=1.00000000
G=0.00000000
gnomad-ASJGNOMAD
AFR8718C=0.97442073
G=0.02557926
gnomad-AFRGNOMAD
FEMALE13848C=0.99299538
G=0.00700462
gnomad-FEMALEGNOMAD
NFE15002C=0.99993336
G=0.00006666
gnomad-NFEGNOMAD


  dbSNP summary of Genotypes for ss2788465708 back to top
No sufficient data to compute Hardy-weinberg probability for ss2788465708.


  Submitted individual genotype for ss2788465708 back to top
There is no individual genotype data for ss2788465708.

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