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Submitted SNP(ss) Details: ss2804516964           
Submitter
HandleGNOMAD
Submitter SNP IDgnomad_4_10147
RefSNP(rs#)clustering in process
Submitted Batch IDgenome_batch_chr4
Submitted DateMay 18, 2017
Publication CitedN.D.
First entry to dbSNPMay 18 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleCTAACCCTAACCCTAACG/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2804516964|allelePos=26|len=51|taxid=9606|alleles='CTAACCCTAACCCTAACG/-'|mol=Genomic
 CCTAACCCTA ACCCTAACCC TAACC
 N
 CTAACCCTAA CCCTAACCCT AACCC

  Submitted Frequency for ss2804516964 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
NFE8818CTAACCCTAACCCTAACG=1.00000000
-=0.00000000
gnomad-NFEGNOMAD
FIN2396CTAACCCTAACCCTAACG=1.00000000
-=0.00000000
gnomad-FINGNOMAD
ASJ166CTAACCCTAACCCTAACG=1.00000000
-=0.00000000
gnomad-ASJGNOMAD
MALE11238CTAACCCTAACCCTAACG=0.99946612
-=0.00053390
gnomad-MALEGNOMAD
EAS1150CTAACCCTAACCCTAACG=1.00000000
-=0.00000000
gnomad-EASGNOMAD
OTH628CTAACCCTAACCCTAACG=0.99840766
-=0.00159236
gnomad-OTHGNOMAD
AMR542CTAACCCTAACCCTAACG=1.00000000
-=0.00000000
gnomad-AMRGNOMAD
FEMALE8912CTAACCCTAACCCTAACG=0.99932677
-=0.00067325
gnomad-FEMALEGNOMAD
AFR6450CTAACCCTAACCCTAACG=0.99829459
-=0.00170543
gnomad-AFRGNOMAD


  dbSNP summary of Genotypes for ss2804516964 back to top
No sufficient data to compute Hardy-weinberg probability for ss2804516964.


  Submitted individual genotype for ss2804516964 back to top
There is no individual genotype data for ss2804516964.

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