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Submitted SNP(ss) Details: ss2848468669           
Submitter
HandleGNOMAD
Submitter SNP IDgnomad_7_15171
RefSNP(rs#)rs1220396422
Submitted Batch IDgenome_batch_chr7
Submitted DateMay 19, 2017
Publication CitedN.D.
First entry to dbSNPMay 19 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2848468669|allelePos=26|len=51|taxid=9606|alleles='T/C'|mol=Genomic
 TGGAAAACTT AAAATATTTA ACATT
 Y
 AGCCCCCTGC AGAAAATACT TGCTG

  Submitted Frequency for ss2848468669 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
AMR648T=1.00000000
C=0.00000000
gnomad-AMRGNOMAD
OTH734T=1.00000000
C=0.00000000
gnomad-OTHGNOMAD
FEMALE9210T=0.99945712
C=0.00054289
gnomad-FEMALEGNOMAD
AFR4004T=1.00000000
C=0.00000000
gnomad-AFRGNOMAD
ASJ236T=1.00000000
C=0.00000000
gnomad-ASJGNOMAD
MALE11280T=0.99955672
C=0.00044326
gnomad-MALEGNOMAD
EAS1210T=1.00000000
C=0.00000000
gnomad-EASGNOMAD
NFE10798T=0.99916649
C=0.00083349
gnomad-NFEGNOMAD
FIN2860T=0.99965036
C=0.00034965
gnomad-FINGNOMAD


  dbSNP summary of Genotypes for ss2848468669 back to top
No sufficient data to compute Hardy-weinberg probability for ss2848468669.


  Submitted individual genotype for ss2848468669 back to top
There is no individual genotype data for ss2848468669.

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