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Submitted SNP(ss) Details: ss2946731854           
Submitter
HandleGNOMAD
Submitter SNP IDrs183779916
RefSNP(rs#)clustering in process
Submitted Batch IDgenome_batch_chr17
Submitted DateMay 23, 2017
Publication CitedN.D.
First entry to dbSNPMay 23 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2946731854|allelePos=26|len=51|taxid=9606|alleles='G/A'|mol=Genomic
 GCTGAATGTG CTCTGGGGTC TCTGG
 R
 GTCTCACCCA CGACCAACTC CCTGG

  Submitted Frequency for ss2946731854 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
NFE14806G=0.99986494
A=0.00013508
gnomad-NFEGNOMAD
FEMALE13640G=0.99926686
A=0.00073314
gnomad-FEMALEGNOMAD
AMR836G=0.97846889
A=0.02153110
gnomad-AMRGNOMAD
OTH966G=0.99896479
A=0.00103520
gnomad-OTHGNOMAD
MALE16964G=0.99929261
A=0.00070738
gnomad-MALEGNOMAD
ASJ300G=1.00000000
A=0.00000000
gnomad-ASJGNOMAD
FIN3480G=1.00000000
A=0.00000000
gnomad-FINGNOMAD
EAS1616G=1.00000000
A=0.00000000
gnomad-EASGNOMAD
AFR8600G=0.99988371
A=0.00011628
gnomad-AFRGNOMAD


  dbSNP summary of Genotypes for ss2946731854 back to top
No sufficient data to compute Hardy-weinberg probability for ss2946731854.


  Submitted individual genotype for ss2946731854 back to top
There is no individual genotype data for ss2946731854.

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