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Submitted SNP(ss) Details: ss2953228200           
Submitter
HandleGNOMAD
Submitter SNP IDgnomad_18_10192
RefSNP(rs#)rs1168032032
Submitted Batch IDgenome_batch_chr18
Submitted DateMay 23, 2017
Publication CitedN.D.
First entry to dbSNPMay 23 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2953228200|allelePos=26|len=51|taxid=9606|alleles='A/T'|mol=Genomic
 TAACCCTAAC CCTAACCCTA ACCCT
 W
 ACCCTAACCC TAACCCCAAC CCCAA

  Submitted Frequency for ss2953228200 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
ASJ206A=1.00000000
T=0.00000000
gnomad-ASJGNOMAD
MALE10674A=0.99990630
T=0.00009369
gnomad-MALEGNOMAD
FIN2218A=1.00000000
T=0.00000000
gnomad-FINGNOMAD
AFR5192A=1.00000000
T=0.00000000
gnomad-AFRGNOMAD
EAS1106A=1.00000000
T=0.00000000
gnomad-EASGNOMAD
FEMALE8732A=0.99988550
T=0.00011452
gnomad-FEMALEGNOMAD
AMR496A=0.99798387
T=0.00201613
gnomad-AMRGNOMAD
NFE9588A=0.99989569
T=0.00010430
gnomad-NFEGNOMAD
OTH600A=1.00000000
T=0.00000000
gnomad-OTHGNOMAD


  dbSNP summary of Genotypes for ss2953228200 back to top
No sufficient data to compute Hardy-weinberg probability for ss2953228200.


  Submitted individual genotype for ss2953228200 back to top
There is no individual genotype data for ss2953228200.

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