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Submitted SNP(ss) Details: ss2959401995           
Submitter
HandleGNOMAD
Submitter SNP IDgnomad_19_60435
RefSNP(rs#)rs1240241852
Submitted Batch IDgenome_batch_chr19
Submitted DateMay 23, 2017
Publication CitedN.D.
First entry to dbSNPMay 23 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2959401995|allelePos=26|len=51|taxid=9606|alleles='C/T'|mol=Genomic
 CTGAGTGTCG TCACCTAAAT TCAGA
 Y
 GGGGAACTGC CCCTGCACAT AGTGA

  Submitted Frequency for ss2959401995 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
ASJ72C=1.00000000
T=0.00000000
gnomad-ASJGNOMAD
MALE3312C=0.99818838
T=0.00181159
gnomad-MALEGNOMAD
NFE2644C=0.99735248
T=0.00264750
gnomad-NFEGNOMAD
AFR672C=0.99553573
T=0.00446429
gnomad-AFRGNOMAD
AMR248C=1.00000000
T=0.00000000
gnomad-AMRGNOMAD
EAS48C=1.00000000
T=0.00000000
gnomad-EASGNOMAD
FEMALE2876C=0.99826145
T=0.00173853
gnomad-FEMALEGNOMAD
FIN2246C=0.99955475
T=0.00044524
gnomad-FINGNOMAD
OTH258C=1.00000000
T=0.00000000
gnomad-OTHGNOMAD


  dbSNP summary of Genotypes for ss2959401995 back to top
No sufficient data to compute Hardy-weinberg probability for ss2959401995.


  Submitted individual genotype for ss2959401995 back to top
There is no individual genotype data for ss2959401995.

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