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Submitted SNP(ss) Details: ss2959401997           
Submitter
HandleGNOMAD
Submitter SNP IDgnomad_19_60462
RefSNP(rs#)rs1183334987
Submitted Batch IDgenome_batch_chr19
Submitted DateMay 23, 2017
Publication CitedN.D.
First entry to dbSNPMay 23 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2959401997|allelePos=26|len=51|taxid=9606|alleles='C/T'|mol=Genomic
 GGGAACTGCC CCTGCACATA GTGAA
 Y
 GGCTCACTGA GCAAACCCCG AGTCC

  Submitted Frequency for ss2959401997 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
MALE5232C=0.99732417
T=0.00267584
gnomad-MALEGNOMAD
AFR1276C=0.99921632
T=0.00078370
gnomad-AFRGNOMAD
OTH370C=0.99459457
T=0.00540541
gnomad-OTHGNOMAD
ASJ104C=1.00000000
T=0.00000000
gnomad-ASJGNOMAD
AMR402C=1.00000000
T=0.00000000
gnomad-AMRGNOMAD
EAS96C=1.00000000
T=0.00000000
gnomad-EASGNOMAD
FEMALE4400C=0.99545455
T=0.00454545
gnomad-FEMALEGNOMAD
NFE4622C=0.99480742
T=0.00519256
gnomad-NFEGNOMAD
FIN2762C=0.99746561
T=0.00253440
gnomad-FINGNOMAD


  dbSNP summary of Genotypes for ss2959401997 back to top
No sufficient data to compute Hardy-weinberg probability for ss2959401997.


  Submitted individual genotype for ss2959401997 back to top
There is no individual genotype data for ss2959401997.

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