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Submitted SNP(ss) Details: ss2972602062           
Submitter
HandleGNOMAD
Submitter SNP IDgnomad_22_16050182
RefSNP(rs#)clustering in process
Submitted Batch IDgenome_batch_chr22
Submitted DateMay 23, 2017
Publication CitedN.D.
First entry to dbSNPMay 23 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2972602062|allelePos=26|len=51|taxid=9606|alleles='C/T'|mol=Genomic
 ATCTTTTGTG ACATGCACGT GGGTT
 Y
 CCAGTAGCAA GAAACTAAAG GGTCG

  Submitted Frequency for ss2972602062 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
MALE13182C=0.99992412
T=0.00007586
gnomad-MALEGNOMAD
AFR6446C=1.00000000
T=0.00000000
gnomad-AFRGNOMAD
OTH720C=1.00000000
T=0.00000000
gnomad-OTHGNOMAD
FIN2274C=1.00000000
T=0.00000000
gnomad-FINGNOMAD
NFE11990C=0.99991661
T=0.00008340
gnomad-NFEGNOMAD
ASJ220C=1.00000000
T=0.00000000
gnomad-ASJGNOMAD
EAS1394C=1.00000000
T=0.00000000
gnomad-EASGNOMAD
AMR636C=1.00000000
T=0.00000000
gnomad-AMRGNOMAD
FEMALE10498C=1.00000000
T=0.00000000
gnomad-FEMALEGNOMAD


  dbSNP summary of Genotypes for ss2972602062 back to top
No sufficient data to compute Hardy-weinberg probability for ss2972602062.


  Submitted individual genotype for ss2972602062 back to top
There is no individual genotype data for ss2972602062.

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